myRT

myRT report for GCA_003999295.1_ASM399929v1

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Seq: CP025330.1 Brevibacterium aurantiacum strain SMQ-1417 chromosome, complete genome (4424341 bp)
Overview 1 RT 1: 310910-317111 bp 2 RT 2: 2064122-2068429 bp Neighborhood of RT #1 [310910, 317251] IstB_IS21 COG4584 RVT-UG22 COG5421 COG5421 Neighborhood of RT #2 [2064122, 2068458] InsE RVT-GII GIIM PHA02517 xerC xerC Feature: gene Location: 310910-311656 bp Ori: AZT91981.1 Feature: domain Description: IstB_IS21 Location: 311078-311603 bp Feature: domain Description: IstB_IS21 Location: 31 1 078-31 1 603 bp Feature: gene Location: 311653-313218 bp Ori: AZT91982.1 Feature: domain Description: COG4584 Location: 311815-312478 bp Feature: domain Description: COG4584 Location: 31 1 81 5-31 2478 bp Feature: gene Location: 313662-315152 bp Ori: AZT91983.1 Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 313878-314394 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 31 3878-31 4394 bp Feature: gene Location: 315409-315597 bp Feature: gene Location: 315674-317251 bp Ori: AZT91985.1 Feature: domain Description: COG5421 Location: 316163-316532 bp Feature: domain Description: COG5421 Location: 31 61 63-31 6532 bp Feature: domain Description: COG5421 Location: 316889-317111 bp Feature: domain Description: COG5421 Location: 31 6889-31 71 1 1 bp Feature: gene Location: 2064122-2064313 bp Feature: domain Description: InsE Location: 2064143-2064299 bp Feature: domain Description: InsE Location: 20641 43-2064299 bp Feature: gene Location: 2064472-2064714 bp Feature: gene Location: 2065467-2066900 bp Ori: AZT93386.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2065788-2066475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2065788-2066475 bp Feature: domain Description: GIIM Note: maturase Location: 2066550-2066775 bp Feature: domain Description: GIIM Note: maturase Location: 2066550-2066775 bp Feature: gene Location: 2067008-2067268 bp Feature: domain Description: PHA02517 Location: 2067023-2067266 bp Feature: domain Description: PHA0251 7 Location: 2067023-2067266 bp Feature: gene Location: 2067370-2068458 bp Ori: AZT93387.1 Feature: domain Description: xerC Location: 2067451-2067778 bp Feature: domain Description: xerC Location: 2067451 -2067778 bp Feature: domain Description: xerC Location: 2067880-2068429 bp Feature: domain Description: xerC Location: 2067880-2068429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), COG4584 (Transposase ), RVT-UG22, COG5421 (Transposase ), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), xerC (PRK01287)