myRT

myRT report for GCA_003999735.1_ASM399973v1

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Seq: CP022572.1 Bacillus mesonae strain H20-5 chromosome, complete genome (5839313 bp)
Overview 1 RT 1: 1256779-1265493 bp 2 RT 2: 2022685-2028386 bp 3 RT 3: 3659128-3666728 bp Neighborhood of RT #1 [1256779, 1265750] PRK11360 HDGYP RVT-GII GIIM RVT-GII GIIM S2P-M50_SpoIVFB PRK15033 Neighborhood of RT #2 [2022685, 2028409] PRK00549 tigrfam_recA RVT-GII HNHc recA recA Neighborhood of RT #3 [3659128, 3666728] YjcZ_2 YncB RVT-GII GIIM RVT-GII GIIM MdoB Feature: gene Location: 1256779-1258020 bp Ori: AZU60836.1 Feature: domain Description: PRK11360 Location: 1257343-1258009 bp Feature: domain Description: PRK1 1 360 Location: 1 257343-1 258009 bp Feature: gene Location: 1258163-1259332 bp Ori: AZU60837.1 Feature: domain Description: HDGYP Location: 1258688-1259258 bp Feature: domain Description: HDGYP Location: 1 258688-1 259258 bp Feature: gene Location: 1259963-1261225 bp Ori: AZU60838.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260176-1260791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2601 76-1 260791 bp Feature: domain Description: GIIM Note: maturase Location: 1260851-1261076 bp Feature: domain Description: GIIM Note: maturase Location: 1 260851 -1 261 076 bp Feature: gene Location: 1261782-1263020 bp Ori: AZU60839.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1261986-1262643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 261 986-1 262643 bp Feature: domain Description: GIIM Note: maturase Location: 1262724-1262943 bp Feature: domain Description: GIIM Note: maturase Location: 1 262724-1 262943 bp Feature: gene Location: 1263173-1264363 bp Ori: AZU60840.1 Feature: domain Description: S2P-M50_SpoIVFB Location: 1263548-1263737 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1 263548-1 263737 bp Feature: gene Location: 1264668-1265750 bp Ori: AZU60841.1 Feature: domain Description: PRK15033 Location: 1265229-1265493 bp Feature: domain Description: PRK1 5033 Location: 1 265229-1 265493 bp Feature: gene Location: 2022685-2023935 bp Ori: AZU61555.1 Feature: domain Description: PRK00549 Location: 2022688-2023918 bp Feature: domain Description: PRK00549 Location: 2022688-202391 8 bp Feature: gene Location: 2024192-2024494 bp Ori: AZU61556.1 Feature: domain Description: tigrfam_recA Location: 2024201-2024483 bp Feature: domain Description: tigrfam_recA Location: 2024201 -2024483 bp Feature: gene Location: 2025319-2027196 bp Ori: AZU61557.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2025634-2026345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2025634-2026345 bp Feature: domain Description: HNHc Note: nucleases Location: 2026933-2027104 bp Feature: domain Description: HNHc Note: nucleases Location: 2026933-20271 04 bp Feature: gene Location: 2027262-2027663 bp Ori: AZU61558.1 Feature: domain Description: recA Location: 2027325-2027649 bp Feature: domain Description: recA Location: 2027325-2027649 bp Feature: gene Location: 2027978-2028409 bp Feature: domain Description: recA Location: 2027981-2028386 bp Feature: domain Description: recA Location: 2027981 -2028386 bp Feature: gene Location: 3659128-3659223 bp Ori: AZU62951.1 Feature: domain Description: YjcZ_2 Location: 3659143-3659209 bp Feature: domain Description: YjcZ_2 Location: 36591 43-3659209 bp Feature: gene Location: 3659343-3660236 bp Ori: AZU62952.1 Feature: domain Description: YncB Location: 3659514-3659994 bp Feature: domain Description: YncB Location: 365951 4-3659994 bp Feature: gene Location: 3660432-3661670 bp Ori: AZU62953.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660636-3661293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3660636-3661 293 bp Feature: domain Description: GIIM Note: maturase Location: 3661374-3661593 bp Feature: domain Description: GIIM Note: maturase Location: 3661 374-3661 593 bp Feature: gene Location: 3662227-3663489 bp Ori: AZU62954.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3662440-3663055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3662440-3663055 bp Feature: domain Description: GIIM Note: maturase Location: 3663115-3663340 bp Feature: domain Description: GIIM Note: maturase Location: 36631 1 5-3663340 bp Feature: gene Location: 3664046-3666007 bp Ori: AZU62955.1 Feature: domain Description: MdoB Location: 3664073-3665945 bp Feature: domain Description: MdoB Location: 3664073-3665945 bp Feature: gene Location: 3666540-3666728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11360 (two-component system sensor histidine kinase AtoS), HDGYP (COG2206), RVT-GII, GIIM (pfam08388), S2P-M50_SpoIVFB (cd06161), PRK15033 (tricarballylate utilization 4Fe-4S protein TcuB), PRK00549 (competence damage-inducible protein A; Provisional), tigrfam_recA (TIGR02012), HNHc (smart00507), recA (PRK09519)
YjcZ_2, YncB (COG1525), MdoB (COG1368)