myRT

myRT report for GCA_004000515.1_ASM400051v1

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Seq: CP034537.1 Pseudomonas poae strain CAP-2018 chromosome, complete genome (7371963 bp)
Overview 1 RT 1: 2797233-2803901 bp 2 RT 2: 5968440-5972919 bp Neighborhood of RT #1 [2797233, 2804200] groEL RVT_N RVT-GII group_II_RT_mat HNH DUF2188 LTA_synthase Neighborhood of RT #2 [5968440, 5972939] DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66 ACR3 Feature: gene Location: 2797233-2798878 bp Gene: groL Feature: domain Description: groEL Location: 2797236-2797911 bp Feature: domain Description: groEL Location: 2797236-279791 1 bp Feature: gene Location: 2799503-2799693 bp Feature: gene Location: 2800059-2801576 bp Gene: ltrA Feature: domain Description: RVT_N Location: 2800062-2800209 bp Feature: domain Description: RVT_N Location: 2800062-2800209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2800257-2800599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2800257-2800599 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2800830-2801148 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2800830-2801 1 48 bp Feature: domain Description: HNH Note: nucleases Location: 2801427-2801565 bp Feature: domain Description: HNH Note: nucleases Location: 2801 427-2801 565 bp Feature: gene Location: 2801693-2801917 bp Ori: AZP70919.1 Feature: domain Description: DUF2188 Location: 2801711-2801888 bp Feature: domain Description: DUF21 88 Location: 2801 71 1 -2801 888 bp Feature: gene Location: 2802263-2804200 bp Ori: AZP70920.1 Feature: domain Description: LTA_synthase Location: 2803091-2803901 bp Feature: domain Description: LTA_synthase Location: 2803091 -2803901 bp Feature: gene Location: 5968440-5968682 bp Feature: gene Location: 5969293-5969409 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5969299-5969389 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5969299-5969389 bp Feature: gene Location: 5969965-5971638 bp Ori: AZP72583.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5970010-5970253 bp Feature: domain Description: RVT_N Location: 597001 0-5970253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5970298-5970934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5970298-5970934 bp Feature: domain Description: GIIM Note: maturase Location: 5970991-5971219 bp Feature: domain Description: GIIM Note: maturase Location: 5970991 -5971 21 9 bp Feature: gene Location: 5971731-5971951 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5971737-5971803 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5971 737-5971 803 bp Feature: gene Location: 5971977-5972939 bp Ori: AZP72584.1 Feature: domain Description: ACR3 Location: 5971995-5972919 bp Feature: domain Description: ACR3 Location: 5971 995-597291 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), HNH (pfam01844), DUF2188 (pfam09954), LTA_synthase (cd16015), DDE_Tnp_IS66 (pfam03050), GIIM (pfam08388), ACR3 (COG0798)