myRT

myRT report for GCA_004006035.1_ASM400603v1

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Seq: CP034760.1 Klebsiella pneumoniae strain NB5306 chromosome, complete genome (5261911 bp)
Overview 1 RT 1: 1377759-1380535 bp 2 RT 2: 1821309-1826181 bp 3 RT 3: 2370123-2374462 bp 4 RT 4: 2916971-2919479 bp 5 RT 5: 3100713-3103544 bp 6 RT 6: 3439440-3443466 bp 7 RT 7: 3447151-3453899 bp 8 RT 8: 3892474-3895254 bp Neighborhood of RT #1 [1377759, 1380535] RVT-GII Neighborhood of RT #2 [1821309, 1826195] dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [2370123, 2374491] Toxin_GhoT_OrtT RVT-GII MhpC ALDH_SaliADH Neighborhood of RT #4 [2916971, 2919479] RVT-GII Neighborhood of RT #5 [3100713, 3103555] PRK10276 RVT-GII DinI Neighborhood of RT #6 [3439440, 3444350] DinI RVT-GII Phage_GPA Neighborhood of RT #7 [3447151, 3453949] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII RVT-GII int Neighborhood of RT #8 [3892474, 3895254] PRK10276 PRK10276 RVT-GII Feature: gene Location: 1377759-1377962 bp Feature: gene Location: 1377955-1378293 bp Feature: gene Location: 1378390-1379874 bp Ori: AZV17320.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378792-1379482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 378792-1 379482 bp Feature: gene Location: 1379874-1380125 bp Feature: gene Location: 1380278-1380535 bp Feature: gene Location: 1821309-1822478 bp Ori: AZV14127.1 Gene: dacD Feature: domain Description: dacD Location: 1821318-1822473 bp Feature: domain Description: dacD Location: 1 821 31 8-1 822473 bp Feature: gene Location: 1822748-1822999 bp Feature: gene Location: 1822999-1824483 bp Ori: AZV17339.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1823401-1824091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 823401 -1 824091 bp Feature: gene Location: 1824565-1825038 bp Ori: AZV14129.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1824568-1825027 bp Feature: domain Description: PRK1 001 6 Location: 1 824568-1 825027 bp Feature: gene Location: 1825137-1826195 bp Ori: AZV14130.1 Feature: domain Description: YccC Location: 1825143-1826181 bp Feature: domain Description: YccC Location: 1 8251 43-1 8261 81 bp Feature: gene Location: 2370123-2370296 bp Ori: AZV14636.1 Feature: domain Description: Toxin_GhoT_OrtT Location: 2370135-2370294 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 23701 35-2370294 bp Feature: gene Location: 2370478-2370729 bp Feature: gene Location: 2370729-2372213 bp Ori: AZV17367.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2371131-2371821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2371 1 31 -2371 821 bp Feature: gene Location: 2372295-2373044 bp Ori: AZV14638.1 Feature: domain Description: MhpC Location: 2372307-2373036 bp Feature: domain Description: MhpC Location: 2372307-2373036 bp Feature: gene Location: 2373058-2374491 bp Ori: AZV14639.1 Feature: domain Description: ALDH_SaliADH Location: 2373193-2374462 bp Feature: domain Description: ALDH_SaliADH Location: 23731 93-2374462 bp Feature: gene Location: 2916971-2917255 bp Feature: gene Location: 2917269-2917340 bp Feature: gene Location: 2917333-2918817 bp Ori: AZV17399.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2917735-2918425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 7735-291 8425 bp Feature: gene Location: 2918817-2919068 bp Feature: gene Location: 2919270-2919479 bp Feature: gene Location: 3100713-3101132 bp Ori: AZV15314.1 Feature: domain Description: PRK10276 Location: 3100716-3101127 bp Feature: domain Description: PRK1 0276 Location: 31 0071 6-31 01 1 27 bp Feature: gene Location: 3101110-3101295 bp Feature: gene Location: 3101211-3102695 bp Ori: AZV17407.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3101613-3102303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 01 61 3-31 02303 bp Feature: gene Location: 3102695-3102946 bp Feature: gene Location: 3103313-3103555 bp Ori: AZV15317.1 Feature: domain Description: DinI Location: 3103364-3103544 bp Feature: domain Description: DinI Location: 31 03364-31 03544 bp Feature: gene Location: 3439440-3439745 bp Ori: AZV15625.1 Feature: domain Description: DinI Location: 3439554-3439740 bp Feature: domain Description: DinI Location: 3439554-3439740 bp Feature: gene Location: 3439684-3439872 bp Feature: gene Location: 3439973-3441457 bp Ori: AZV17425.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440375-3441065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440375-3441 065 bp Feature: gene Location: 3441457-3441708 bp Feature: gene Location: 3441936-3444350 bp Ori: AZV15627.1 Feature: domain Description: Phage_GPA Location: 3442500-3443466 bp Feature: domain Description: Phage_GPA Location: 3442500-3443466 bp Feature: gene Location: 3447151-3448029 bp Ori: AZV17427.1 Feature: domain Description: Phage_CI_repr Location: 3447178-3447361 bp Feature: domain Description: Phage_CI_repr Location: 34471 78-3447361 bp Feature: domain Description: Phage_CI_repr Location: 3447490-3447682 bp Feature: domain Description: Phage_CI_repr Location: 3447490-3447682 bp Feature: domain Description: Phage_CI_C Location: 3447709-3448003 bp Feature: domain Description: Phage_CI_C Location: 3447709-3448003 bp Feature: gene Location: 3448041-3448985 bp Feature: gene Location: 3449084-3450568 bp Ori: AZV17428.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3449486-3450176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3449486-34501 76 bp Feature: gene Location: 3450568-3450819 bp Feature: gene Location: 3450994-3452478 bp Ori: AZV17429.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451396-3452086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3451 396-3452086 bp Feature: gene Location: 3452478-3452729 bp Feature: gene Location: 3452897-3453949 bp Ori: AZV15638.1 Feature: domain Description: int Location: 3452900-3453899 bp Feature: domain Description: int Location: 3452900-3453899 bp Feature: gene Location: 3892474-3892791 bp Ori: AZV16019.1 Feature: domain Description: PRK10276 Location: 3892480-3892594 bp Feature: domain Description: PRK1 0276 Location: 3892480-3892594 bp Feature: domain Description: PRK10276 Location: 3892621-3892690 bp Feature: domain Description: PRK1 0276 Location: 3892621 -3892690 bp Feature: gene Location: 3892791-3893030 bp Feature: gene Location: 3893108-3894592 bp Ori: AZV17450.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3893510-3894200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389351 0-3894200 bp Feature: gene Location: 3894592-3894843 bp Feature: gene Location: 3895045-3895254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), Toxin_GhoT_OrtT (pfam10753), MhpC (COG0596), ALDH_SaliADH (cd07105), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_GPA (pfam05840)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)