myRT

myRT report for GCA_004006545.1_ASM400654v1

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Seq: CP034786.1 Escherichia coli strain ECZP248 plasmid pTB402, complete sequence (143706 bp)
Overview 1 RT 1: 74444-79239 bp 2 RT 2: 86917-90309 bp Neighborhood of RT #1 [74444, 79256] RAYT RVT-GII GIIM PRK11114 Neighborhood of RT #2 [86917, 90308] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 74444-74830 bp Gene: tnpA Feature: domain Description: RAYT Location: 74489-74831 bp Feature: domain Description: RAYT Location: 74489-74831 bp Feature: gene Location: 74799-74915 bp Feature: gene Location: 75016-76362 bp Ori: AZW02460.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75304-75922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75304-75922 bp Feature: domain Description: GIIM Note: maturase Location: 75970-76201 bp Feature: domain Description: GIIM Note: maturase Location: 75970-76201 bp Feature: gene Location: 76587-76766 bp Feature: gene Location: 77106-79256 bp Ori: AZW02461.1 Feature: domain Description: PRK11114 Location: 77166-79239 bp Feature: domain Description: PRK1 1 1 1 4 Location: 771 66-79239 bp Feature: gene Location: 86917-87123 bp Feature: gene Location: 87154-87621 bp Feature: domain Description: PHA02517 Location: 87157-87616 bp Feature: domain Description: PHA0251 7 Location: 871 57-8761 6 bp Feature: gene Location: 87702-89210 bp Ori: AZW02498.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87960-88692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87960-88692 bp Feature: domain Description: GIIM Note: maturase Location: 88767-88965 bp Feature: domain Description: GIIM Note: maturase Location: 88767-88965 bp Feature: gene Location: 89519-89887 bp Feature: gene Location: 89883-90308 bp Feature: domain Description: PHA02517 Location: 89973-90309 bp Feature: domain Description: PHA0251 7 Location: 89973-90309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII, GIIM (pfam08388), PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), PHA02517 (putative transposase OrfB; Reviewed)