myRT

myRT report for GCA_004010575.1_ASM401057v1

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Seq: CP034805.1 Escherichia coli strain 2009C-3554 plasmid p2009C-3554-2, complete sequence (94014 bp)
Overview 1 RT 1: 23517-27088 bp Neighborhood of RT #1 [23517, 27088] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc Feature: gene Location: 23517-23822 bp Feature: gene Location: 23826-24728 bp Feature: domain Description: DUF1281 Location: 23895-24423 bp Feature: domain Description: DUF1 281 Location: 23895-24423 bp Feature: domain Description: DUF1281_C Location: 24429-24657 bp Feature: domain Description: DUF1 281 _C Location: 24429-24657 bp Feature: gene Location: 24805-26529 bp Feature: domain Description: RVT_N Location: 24862-25099 bp Feature: domain Description: RVT_N Location: 24862-25099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25150-25798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 50-25798 bp Feature: domain Description: YkfC Location: 25930-26086 bp Feature: domain Description: YkfC Location: 25930-26086 bp Feature: domain Description: HNHc Note: nucleases Location: 26314-26473 bp Feature: domain Description: HNHc Note: nucleases Location: 2631 4-26473 bp Feature: gene Location: 26570-26710 bp Feature: gene Location: 26792-27088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)