myRT

myRT report for GCA_004014965.1_ASM401496v1

Download annotations/find similar RTs

Seq: CP025684.1 Klebsiella pneumoniae strain L5-2 chromosome, complete genome (5237123 bp)
Overview 1 RT 1: 730312-737663 bp 2 RT 2: 3500061-3505193 bp Neighborhood of RT #1 [730312, 737713] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [3500061, 3506452] PinE RVT-Retrons DEXHc_RE Feature: gene Location: 730312-731076 bp Ori: QAA14267.1 Feature: domain Description: FimC Location: 730357-731059 bp Feature: domain Description: FimC Location: 730357-731 059 bp Feature: gene Location: 731123-733717 bp Ori: QAA14268.1 Feature: domain Description: FimD Location: 731165-733706 bp Feature: domain Description: FimD Location: 731 1 65-733706 bp Feature: gene Location: 733714-735798 bp Ori: QAA14269.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 734125-734569 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7341 25-734569 bp Feature: gene Location: 735840-736295 bp Ori: QAA14270.1 Feature: domain Description: Integrase_1 Location: 735843-736077 bp Feature: domain Description: Integrase_1 Location: 735843-736077 bp Feature: gene Location: 736475-737713 bp Feature: domain Description: PRK09692 Location: 736481-737663 bp Feature: domain Description: PRK09692 Location: 736481 -737663 bp Feature: gene Location: 3500061-3500627 bp Ori: QAA16785.1 Feature: domain Description: PinE Location: 3500064-3500607 bp Feature: domain Description: PinE Location: 3500064-3500607 bp Feature: gene Location: 3501157-3502035 bp Feature: gene Location: 3502294-3503223 bp Ori: QAA16787.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3502450-3502999 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3502450-3502999 bp Feature: gene Location: 3503263-3503619 bp Feature: gene Location: 3505004-3506452 bp Feature: domain Description: DEXHc_RE Location: 3505034-3505193 bp Feature: domain Description: DEXHc_RE Location: 3505034-35051 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), PinE (COG1961), RVT-Retrons, DEXHc_RE (cd17926)