myRT

myRT report for GCA_004026185.1_ASM402618v1

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Seq: CP035004.1 Staphylococcus aureus strain PCFA-221 plasmid pP541, complete sequence (19185 bp)
Overview 1 RT 1: 25-5285 bp 2 RT 2: 7637-11076 bp Neighborhood of RT #1 [25, 5560] POD-like_MBL-fold RHOD RHOD PinE RVT-Retrons PRK06848 DUF536 Neighborhood of RT #2 [7637, 11096] cad HTH_ARSR RVT-Retrons HTH_XRE SR_ResInv Feature: gene Location: 25-1359 bp Feature: domain Description: POD-like_MBL-fold Location: 34-616 bp Feature: domain Description: POD-like_MBL-fold Location: 34-61 6 bp Feature: domain Description: RHOD Location: 850-922 bp Feature: domain Description: RHOD Location: 850-922 bp Feature: domain Description: RHOD Location: 1108-1339 bp Feature: domain Description: RHOD Location: 1 1 08-1 339 bp Feature: gene Location: 1530-2108 bp Feature: domain Description: PinE Location: 1533-2088 bp Feature: domain Description: PinE Location: 1 533-2088 bp Feature: gene Location: 2329-4125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2500-3100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2500-31 00 bp Feature: gene Location: 4267-4689 bp Feature: domain Description: PRK06848 Location: 4282-4684 bp Feature: domain Description: PRK06848 Location: 4282-4684 bp Feature: gene Location: 4838-5560 bp Feature: domain Description: DUF536 Location: 5126-5285 bp Feature: domain Description: DUF536 Location: 51 26-5285 bp Feature: gene Location: 7637-8254 bp Feature: domain Description: cad Location: 7673-8252 bp Feature: domain Description: cad Location: 7673-8252 bp Feature: gene Location: 8273-8620 bp Feature: domain Description: HTH_ARSR Location: 8417-8606 bp Feature: domain Description: HTH_ARSR Location: 841 7-8606 bp Feature: gene Location: 9012-9902 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9159-9687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91 59-9687 bp Feature: gene Location: 9904-10203 bp Feature: domain Description: HTH_XRE Location: 9916-10081 bp Feature: domain Description: HTH_XRE Location: 991 6-1 0081 bp Feature: gene Location: 10902-11096 bp Feature: domain Description: SR_ResInv Location: 10908-11076 bp Feature: domain Description: SR_ResInv Location: 1 0908-1 1 076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT POD-like_MBL-fold (cd07724), RHOD (smart00450), PinE (COG1961), RVT-Retrons, PRK06848 (cytidine deaminase), DUF536 (pfam04394), cad (TIGR00779), HTH_ARSR (smart00418), HTH_XRE (smart00530), SR_ResInv (cd03768)