myRT

myRT report for GCA_004102625.1_ASM410262v1

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Seq: CP035215.1 Klebsiella michiganensis strain M82255 plasmid pKOCBH-A, complete sequence (355004 bp)
Overview 1 RT 1: 142410-148607 bp 2 RT 2: 204965-209557 bp Neighborhood of RT #1 [142410, 148612] DUF2254 PRK09928 RVT-GII BetT IS5 Neighborhood of RT #2 [204965, 209565] RVT-GII PRK10276 umuC Feature: gene Location: 142410-143687 bp Ori: QAS68184.1 Feature: domain Description: DUF2254 Location: 142452-143520 bp Feature: domain Description: DUF2254 Location: 1 42452-1 43520 bp Feature: gene Location: 143751-144212 bp Ori: QAS68185.1 Feature: domain Description: PRK09928 Location: 143772-144210 bp Feature: domain Description: PRK09928 Location: 1 43772-1 4421 0 bp Feature: gene Location: 144543-146129 bp Ori: QAS68186.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145047-145737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 45047-1 45737 bp Feature: gene Location: 146178-147656 bp Ori: QAS68187.1 Feature: domain Description: BetT Location: 146205-147648 bp Feature: domain Description: BetT Location: 1 46205-1 47648 bp Feature: gene Location: 148088-148612 bp Ori: QAS68188.1 Feature: domain Description: IS5 Location: 148091-148607 bp Feature: domain Description: IS5 Location: 1 48091 -1 48607 bp Feature: gene Location: 204965-205237 bp Feature: gene Location: 205221-205724 bp Feature: gene Location: 205829-207481 bp Ori: QAS68243.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206231-206921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206231 -206921 bp Feature: gene Location: 207884-208300 bp Ori: QAS68244.1 Feature: domain Description: PRK10276 Location: 207923-208292 bp Feature: domain Description: PRK1 0276 Location: 207923-208292 bp Feature: gene Location: 208300-209565 bp Ori: QAS68245.1 Feature: domain Description: umuC Location: 208303-209557 bp Feature: domain Description: umuC Location: 208303-209557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2254 (pfam10011), PRK09928 (choline transport protein BetT; Provisional), RVT-GII, BetT (COG1292), IS5 (COG3039), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP035214.1 Klebsiella michiganensis strain M82255 chromosome, complete genome (5914592 bp)
Overview 1 RT 1: 892821-898080 bp 2 RT 2: 2874951-2880737 bp 3 RT 3: 4853415-4855965 bp 4 RT 4: 5490953-5495828 bp Neighborhood of RT #1 [892821, 898085] PRK10016 RVT-GII Caps_assemb_Wzi dacD Neighborhood of RT #2 [2874951, 2880739] PRK08155 IlvB_leader RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 TisB_tox Neighborhood of RT #3 [4853415, 4855970] group_II_RT_mat RVT-GII group_II_RT_mat PRK10597 Neighborhood of RT #4 [5490953, 5495828] RVT-GII Feature: gene Location: 892821-893294 bp Ori: QAS63430.1 Feature: domain Description: PRK10016 Location: 892824-893283 bp Feature: domain Description: PRK10016 Location: 892 82 4-8932 83 bp Feature: gene Location: 893655-894071 bp Feature: gene Location: 893981-894862 bp Ori: QAS63432.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894386-894755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894386-894755 bp Feature: gene Location: 895329-896765 bp Ori: QAS63433.1 Feature: domain Description: Caps_assemb_Wzi Location: 895599-896724 bp Feature: domain Description: Caps_assemb_Wzi Location: 895599-89672 4 bp Feature: gene Location: 896919-898085 bp Ori: QAS63434.1 Feature: domain Description: dacD Location: 896922-898080 bp Feature: domain Description: dacD Location: 89692 2 -898080 bp Feature: gene Location: 2874951-2876639 bp Ori: QAS65258.1 Feature: domain Description: PRK08155 Location: 2874954-2876637 bp Feature: domain Description: PRK08155 Location: 2 874954-2 876637 bp Feature: gene Location: 2876742-2876837 bp Ori: QAS65259.1 Feature: domain Description: IlvB_leader Location: 2876745-2876835 bp Feature: domain Description: IlvB_leader Location: 2 876745-2 876835 bp Feature: gene Location: 2877200-2878687 bp Ori: QAS65260.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877605-2878295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 877605-2 8782 95 bp Feature: gene Location: 2879129-2880349 bp Ori: QAS65261.1 Feature: domain Description: zf-ISL3 Location: 2879261-2879387 bp Feature: domain Description: zf-ISL3 Location: 2 8792 61-2 879387 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2879405-2879552 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2 879405-2 879552 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2879603-2880308 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 879603-2 880308 bp Feature: gene Location: 2880650-2880739 bp Ori: QAS65262.1 Feature: domain Description: TisB_tox Location: 2880653-2880737 bp Feature: domain Description: TisB_tox Location: 2 880653-2 880737 bp Feature: gene Location: 4853415-4853684 bp Feature: gene Location: 4854071-4854652 bp Ori: QAS67017.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4854416-4854590 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4854416-4854590 bp Feature: gene Location: 4854649-4855182 bp Ori: QAS67018.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4854655-4855147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4854655-4855147 bp Feature: gene Location: 4855182-4855658 bp Ori: QAS67019.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4855239-4855524 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 48552 39-485552 4 bp Feature: gene Location: 4855737-4855970 bp Ori: QAS67020.1 Feature: domain Description: PRK10597 Location: 4855740-4855965 bp Feature: domain Description: PRK10597 Location: 4855740-4855965 bp Feature: gene Location: 5490953-5493244 bp Feature: gene Location: 5493258-5493527 bp Feature: gene Location: 5494029-5494928 bp Ori: QAS67627.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5494434-5494818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5494434-5494818 bp Feature: gene Location: 5494819-5495232 bp Feature: gene Location: 5495589-5495828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, Caps_assemb_Wzi (pfam14052), dacD (PRK11397), PRK08155 (acetolactate synthase large subunit), IlvB_leader (pfam08049), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), TisB_tox (TIGR04459)
group_II_RT_mat (TIGR04416), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: CP035216.1 Klebsiella michiganensis strain M82255 plasmid pKOCBH-B, complete sequence (231662 bp)
Overview 1 RT 1: 89339-94858 bp Neighborhood of RT #1 [89339, 94872] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 PRK10276 Feature: gene Location: 89339-90010 bp Ori: QAS68513.1 Feature: domain Description: Plasmid_stab_B Location: 89354-89561 bp Feature: domain Description: Plasmid_stab_B Location: 893 54-89561 bp Feature: domain Description: Plasmid_stab_B Location: 89666-89873 bp Feature: domain Description: Plasmid_stab_B Location: 89666-89873 bp Feature: gene Location: 90013-90984 bp Ori: QAS68514.1 Feature: domain Description: StbA Location: 90016-90961 bp Feature: domain Description: StbA Location: 90016-90961 bp Feature: gene Location: 91233-92717 bp Ori: QAS68515.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91635-92325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9163 5-923 25 bp Feature: gene Location: 93164-94384 bp Ori: QAS68516.1 Feature: domain Description: zf-ISL3 Location: 93296-93422 bp Feature: domain Description: zf-ISL3 Location: 93 296-93 422 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 93440-93587 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 93 440-93 587 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 93638-94343 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 93 63 8-943 43 bp Feature: gene Location: 94447-94872 bp Ori: QAS68517.1 Feature: domain Description: PRK10276 Location: 94450-94858 bp Feature: domain Description: PRK10276 Location: 94450-94858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)