myRT

myRT report for GCA_004114915.1_ASM411491v1

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Seq: CP022220.1 Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence (979173 bp)
Overview 1 RT 1: 337034-341172 bp 2 RT 2: 356878-364084 bp 3 RT 3: 440288-443547 bp 4 RT 4: 576738-579095 bp Neighborhood of RT #1 [337034, 341172] TPR_19 RVT-GII Neighborhood of RT #2 [356878, 364125] Tm-1-like DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 COG3436 RVT-GII GIIM TnpB_IS66 Neighborhood of RT #3 [440288, 443547] COG3335 RVT-GII COG3415 Neighborhood of RT #4 [576738, 579095] RVT-GII GIIM Feature: gene Location: 337034-337255 bp Feature: domain Description: TPR_19 Location: 337082-337220 bp Feature: domain Description: TPR_1 9 Location: 337082-337220 bp Feature: gene Location: 338166-339122 bp Feature: gene Location: 339410-340567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340001-340202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340001 -340202 bp Feature: gene Location: 340566-340733 bp Feature: gene Location: 340825-341172 bp Feature: gene Location: 356878-358131 bp Feature: domain Description: Tm-1-like Location: 356950-358093 bp Feature: domain Description: Tm-1 -like Location: 356950-358093 bp Feature: gene Location: 358350-358583 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 358419-358530 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 35841 9-358530 bp Feature: gene Location: 358622-360538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358829-359483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358829-359483 bp Feature: domain Description: GIIM Note: maturase Location: 359570-359780 bp Feature: domain Description: GIIM Note: maturase Location: 359570-359780 bp Feature: domain Description: DDE_Tnp_IS66 Location: 359960-360503 bp Feature: domain Description: DDE_Tnp_IS66 Location: 359960-360503 bp Feature: gene Location: 360753-360881 bp Feature: gene Location: 361054-361899 bp Feature: domain Description: COG3436 Location: 361390-361855 bp Feature: domain Description: COG3436 Location: 361 390-361 855 bp Feature: gene Location: 362173-363447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362383-363040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362383-363040 bp Feature: domain Description: GIIM Note: maturase Location: 363121-363337 bp Feature: domain Description: GIIM Note: maturase Location: 3631 21 -363337 bp Feature: gene Location: 363731-363949 bp Feature: gene Location: 363961-364125 bp Feature: domain Description: TnpB_IS66 Location: 363964-364084 bp Feature: domain Description: TnpB_IS66 Location: 363964-364084 bp Feature: gene Location: 440288-440899 bp Feature: gene Location: 441000-441425 bp Feature: domain Description: COG3335 Location: 441066-441408 bp Feature: domain Description: COG3335 Location: 441 066-441 408 bp Feature: gene Location: 441625-442179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441841-442084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 841 -442084 bp Feature: gene Location: 442682-443170 bp Feature: domain Description: COG3415 Location: 442688-443027 bp Feature: domain Description: COG341 5 Location: 442688-443027 bp Feature: gene Location: 443206-443547 bp Feature: gene Location: 576738-576971 bp Feature: gene Location: 577051-577194 bp Feature: gene Location: 577294-577794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577297-577567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577297-577567 bp Feature: domain Description: GIIM Note: maturase Location: 577645-577780 bp Feature: domain Description: GIIM Note: maturase Location: 577645-577780 bp Feature: gene Location: 577862-578107 bp Feature: gene Location: 578382-579095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_19 (pfam14559), RVT-GII, Tm-1-like (cl02262), DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), COG3436 (Transposase ), TnpB_IS66 (pfam05717), COG3335 (Transposase ), COG3415 (Transposase )