myRT

myRT report for GCA_004114935.1_ASM411493v1

Download annotations/find similar RTs

Seq: CP022221.1 Bradyrhizobium sp. CCBAU 51778 chromosome, complete genome (9342022 bp)
Overview 1 RT 1: 2137009-2139398 bp 2 RT 2: 2273612-2278588 bp 3 RT 3: 2358057-2361375 bp 4 RT 4: 2671164-2677846 bp 5 RT 5: 3152951-3157861 bp Neighborhood of RT #1 [2137009, 2139442] RVT-GII NirD Neighborhood of RT #2 [2273612, 2278588] Transposase_mut RVT-GII Neighborhood of RT #3 [2358057, 2361377] Terminase_2 RVT-UG11 PinE Neighborhood of RT #4 [2671164, 2677932] RVT-GII GIIM RVT-GII RVT-GII GIIM DUF4096 MFS_3 Neighborhood of RT #5 [3152951, 3158040] GT_2_like_c COG3415 RVT-GII GIIM DDE_3 PAP2_BcrC_like Feature: gene Location: 2137009-2137356 bp Feature: gene Location: 2137443-2137997 bp Feature: gene Location: 2137819-2138331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2138053-2138182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 38053-21 381 82 bp Feature: gene Location: 2138625-2138966 bp Feature: gene Location: 2139047-2139442 bp Feature: domain Description: NirD Location: 2139071-2139398 bp Feature: domain Description: NirD Location: 21 39071 -21 39398 bp Feature: gene Location: 2273612-2273809 bp Feature: gene Location: 2274121-2275320 bp Feature: domain Description: Transposase_mut Location: 2274130-2275234 bp Feature: domain Description: Transposase_mut Location: 22741 30-2275234 bp Feature: gene Location: 2275895-2277277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276222-2276909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276222-2276909 bp Feature: gene Location: 2277471-2277794 bp Feature: gene Location: 2278409-2278588 bp Feature: gene Location: 2358057-2358596 bp Feature: domain Description: Terminase_2 Location: 2358066-2358522 bp Feature: domain Description: Terminase_2 Location: 2358066-2358522 bp Feature: gene Location: 2358742-2358882 bp Feature: gene Location: 2359389-2360132 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2359509-2359950 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2359509-2359950 bp Feature: gene Location: 2360548-2360688 bp Feature: gene Location: 2361159-2361377 bp Feature: domain Description: PinE Location: 2361162-2361375 bp Feature: domain Description: PinE Location: 2361 1 62-2361 375 bp Feature: gene Location: 2671164-2671322 bp Feature: gene Location: 2671612-2672097 bp Feature: gene Location: 2672476-2673504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672767-2673331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672767-2673331 bp Feature: gene Location: 2673501-2673803 bp Feature: domain Description: GIIM Note: maturase Location: 2673504-2673714 bp Feature: domain Description: GIIM Note: maturase Location: 2673504-267371 4 bp Feature: gene Location: 2673338-2674162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2673347-2673431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2673347-2673431 bp Feature: gene Location: 2674177-2674305 bp Feature: gene Location: 2674378-2675637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674594-2675245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674594-2675245 bp Feature: domain Description: GIIM Note: maturase Location: 2675329-2675533 bp Feature: domain Description: GIIM Note: maturase Location: 2675329-2675533 bp Feature: gene Location: 2675813-2676055 bp Feature: domain Description: DUF4096 Location: 2675837-2676029 bp Feature: domain Description: DUF4096 Location: 2675837-2676029 bp Feature: gene Location: 2676253-2677932 bp Feature: domain Description: MFS_3 Location: 2676301-2677846 bp Feature: domain Description: MFS_3 Location: 2676301 -2677846 bp Feature: gene Location: 3152951-3153988 bp Feature: domain Description: GT_2_like_c Location: 3152981-3153716 bp Feature: domain Description: GT_2_like_c Location: 31 52981 -31 5371 6 bp Feature: gene Location: 3154346-3154972 bp Feature: domain Description: COG3415 Location: 3154349-3154733 bp Feature: domain Description: COG341 5 Location: 31 54349-31 54733 bp Feature: gene Location: 3155342-3156655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3155558-3156212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 55558-31 5621 2 bp Feature: domain Description: GIIM Note: maturase Location: 3156293-3156509 bp Feature: domain Description: GIIM Note: maturase Location: 31 56293-31 56509 bp Feature: gene Location: 3156652-3157167 bp Feature: domain Description: DDE_3 Location: 3156688-3157075 bp Feature: domain Description: DDE_3 Location: 31 56688-31 57075 bp Feature: gene Location: 3157180-3158040 bp Feature: domain Description: PAP2_BcrC_like Location: 3157477-3157861 bp Feature: domain Description: PAP2_BcrC_like Location: 31 57477-31 57861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NirD (COG2146), Transposase_mut (pfam00872), Terminase_2 (pfam03592), RVT-UG11, PinE (COG1961), GIIM (pfam08388), DUF4096 (pfam13340), MFS_3 (pfam05977), GT_2_like_c (cd04186)
COG3415 (Transposase ), DDE_3 (pfam13358), PAP2_BcrC_like (cd03385)