myRT

myRT report for GCA_004114975.1_ASM411497v1

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Seq: CP030052.1 Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence (981946 bp)
Overview 1 RT 1: 49935-53153 bp 2 RT 2: 928909-934730 bp 3 RT 3: 948923-956472 bp Neighborhood of RT #1 [49935, 53272] COG3335 RVT-GII COG3415 Neighborhood of RT #2 [928909, 934730] TadD RVT-GII Ser_Recombinase Neighborhood of RT #3 [948923, 956624] Tm-1-like DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 TnpB_IS66 RVT-GII GIIM TnpB_IS66 InsE Feature: gene Location: 49935-51001 bp Feature: gene Location: 51102-51476 bp Feature: domain Description: COG3335 Location: 51117-51459 bp Feature: domain Description: COG3335 Location: 51 1 1 7-51 459 bp Feature: gene Location: 51473-52281 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51689-51935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 689-51 935 bp Feature: gene Location: 52368-52731 bp Feature: gene Location: 52808-53272 bp Feature: domain Description: COG3415 Location: 52814-53153 bp Feature: domain Description: COG341 5 Location: 5281 4-531 53 bp Feature: gene Location: 928909-929451 bp Feature: domain Description: TadD Location: 929284-929443 bp Feature: domain Description: TadD Location: 929284-929443 bp Feature: gene Location: 930211-930834 bp Feature: gene Location: 931455-932277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931458-931713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 458-931 71 3 bp Feature: gene Location: 932771-934011 bp Feature: domain Description: Ser_Recombinase Location: 932825-933239 bp Feature: domain Description: Ser_Recombinase Location: 932825-933239 bp Feature: gene Location: 934098-934730 bp Feature: gene Location: 948923-950098 bp Ori: QAU43792.1 Feature: domain Description: Tm-1-like Location: 948926-950060 bp Feature: domain Description: Tm-1 -like Location: 948926-950060 bp Feature: gene Location: 950395-951252 bp Feature: domain Description: DDE_Tnp_IS66 Location: 950401-951067 bp Feature: domain Description: DDE_Tnp_IS66 Location: 950401 -951 067 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 951088-951199 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 951 088-951 1 99 bp Feature: gene Location: 951332-952585 bp Ori: QAU43793.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951539-952193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 539-9521 93 bp Feature: domain Description: GIIM Note: maturase Location: 952280-952490 bp Feature: domain Description: GIIM Note: maturase Location: 952280-952490 bp Feature: gene Location: 953134-953946 bp Feature: domain Description: COG3436 Location: 953470-953935 bp Feature: domain Description: COG3436 Location: 953470-953935 bp Feature: gene Location: 953992-954186 bp Ori: QAU43794.1 Feature: domain Description: TnpB_IS66 Location: 954016-954157 bp Feature: domain Description: TnpB_IS66 Location: 95401 6-9541 57 bp Feature: gene Location: 954220-955446 bp Ori: QAU43889.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954382-955039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954382-955039 bp Feature: domain Description: GIIM Note: maturase Location: 955120-955336 bp Feature: domain Description: GIIM Note: maturase Location: 9551 20-955336 bp Feature: gene Location: 956008-956226 bp Ori: QAU43795.1 Feature: domain Description: TnpB_IS66 Location: 956035-956185 bp Feature: domain Description: TnpB_IS66 Location: 956035-9561 85 bp Feature: gene Location: 956223-956624 bp Ori: QAU43796.1 Feature: domain Description: InsE Location: 956256-956472 bp Feature: domain Description: InsE Location: 956256-956472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3335 (Transposase ), RVT-GII, COG3415 (Transposase ), TadD (COG5010), Ser_Recombinase (cl02788), Tm-1-like (cl02262), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), COG3436 (Transposase )
TnpB_IS66 (pfam05717), InsE (COG2963)