myRT

myRT report for GCA_004119955.1_ASM411995v1

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Seq: CP026134.1 Klebsiella pneumoniae strain F5 plasmid pF5_2, complete sequence (112465 bp)
Overview 1 RT 1: 96571-100598 bp Neighborhood of RT #1 [96571, 100615] INT_P4_C RVT-GII YafO_toxin Feature: gene Location: 96571-96951 bp Feature: gene Location: 96946-98046 bp Ori: QAW64911.1 Feature: domain Description: INT_P4_C Location: 97405-97951 bp Feature: domain Description: INT_P4_C Location: 97405-97951 bp Feature: gene Location: 98133-99617 bp Ori: QAW64912.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98535-99225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98535-99225 bp Feature: gene Location: 99617-99868 bp Feature: gene Location: 100205-100615 bp Ori: QAW64914.1 Feature: domain Description: YafO_toxin Location: 100313-100598 bp Feature: domain Description: YafO_toxin Location: 1 0031 3-1 00598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, YafO_toxin (pfam13957)

Seq: CP026132.1 Klebsiella pneumoniae strain F5 chromosome, complete genome (5537825 bp)
Overview 1 RT 1: 1231892-1236777 bp 2 RT 2: 1395933-1398709 bp 3 RT 3: 1847903-1852775 bp 4 RT 4: 1868516-1874778 bp 5 RT 5: 3122090-3126228 bp 6 RT 6: 3273381-3277480 bp 7 RT 7: 3346213-3350475 bp 8 RT 8: 3665527-3669553 bp 9 RT 9: 3673238-3678076 bp Neighborhood of RT #1 [1231892, 1236782] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1395933, 1398709] RVT-GII Neighborhood of RT #3 [1847903, 1852789] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [1868516, 1874778] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3122090, 3126228] umuC PRK10276 RVT-GII Neighborhood of RT #6 [3273381, 3277491] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3346213, 3350513] PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [3665527, 3670437] DinI RVT-GII Phage_GPA Neighborhood of RT #9 [3673238, 3678126] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1231892-1234276 bp Ori: QAW60527.1 Feature: domain Description: Phage_GPA Location: 1232456-1233422 bp Feature: domain Description: Phage_GPA Location: 12 32 456-12 3342 2 bp Feature: gene Location: 1234506-1234757 bp Feature: gene Location: 1234757-1236241 bp Ori: QAW60529.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235159-1235849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 35159-12 35849 bp Feature: gene Location: 1236349-1236537 bp Feature: gene Location: 1236549-1236782 bp Ori: QAW60531.1 Feature: domain Description: DinI Location: 1236594-1236777 bp Feature: domain Description: DinI Location: 12 36594-12 36777 bp Feature: gene Location: 1395933-1396136 bp Feature: gene Location: 1396129-1396467 bp Feature: gene Location: 1396564-1398048 bp Ori: QAW60689.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396966-1397656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396966-1397656 bp Feature: gene Location: 1398048-1398299 bp Feature: gene Location: 1398452-1398709 bp Feature: gene Location: 1847903-1849072 bp Ori: QAW61069.1 Feature: domain Description: dacD Location: 1847912-1849067 bp Feature: domain Description: dacD Location: 1847912 -1849067 bp Feature: gene Location: 1849342-1849593 bp Feature: gene Location: 1849593-1851077 bp Ori: QAW61071.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849995-1850685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849995-1850685 bp Feature: gene Location: 1851159-1851632 bp Ori: QAW61072.1 Feature: domain Description: PRK10016 Location: 1851162-1851621 bp Feature: domain Description: PRK10016 Location: 1851162 -185162 1 bp Feature: gene Location: 1851731-1852789 bp Ori: QAW61073.1 Feature: domain Description: YccC Location: 1851737-1852775 bp Feature: domain Description: YccC Location: 1851737-1852 775 bp Feature: gene Location: 1868516-1869619 bp Ori: QAW61093.1 Feature: domain Description: STKc_PknB_like Location: 1868648-1869089 bp Feature: domain Description: STKc_PknB_like Location: 1868648-1869089 bp Feature: gene Location: 1869689-1869931 bp Feature: gene Location: 1870178-1871278 bp Ori: QAW61094.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1870361-1870889 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1870361-1870889 bp Feature: gene Location: 1871393-1873669 bp Ori: QAW61095.1 Feature: domain Description: AAA_15 Location: 1871426-1872434 bp Feature: domain Description: AAA_15 Location: 187142 6-1872 434 bp Feature: gene Location: 1874548-1874778 bp Feature: gene Location: 3122090-3123355 bp Ori: QAW62272.1 Feature: domain Description: umuC Location: 3122093-3123353 bp Feature: domain Description: umuC Location: 312 2 093-312 3353 bp Feature: gene Location: 3123357-3123776 bp Ori: QAW62273.1 Feature: domain Description: PRK10276 Location: 3123360-3123771 bp Feature: domain Description: PRK102 76 Location: 312 3360-312 3771 bp Feature: gene Location: 3123856-3125340 bp Ori: QAW62274.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3124258-3124948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312 42 58-312 4948 bp Feature: gene Location: 3125340-3125591 bp Feature: gene Location: 3126139-3126228 bp Feature: gene Location: 3273381-3274646 bp Ori: QAW62419.1 Feature: domain Description: umuC Location: 3273384-3274644 bp Feature: domain Description: umuC Location: 32 73384-32 74644 bp Feature: gene Location: 3274649-3275068 bp Ori: QAW62420.1 Feature: domain Description: PRK10276 Location: 3274652-3275063 bp Feature: domain Description: PRK102 76 Location: 32 74652 -32 75063 bp Feature: gene Location: 3275147-3276631 bp Ori: QAW62421.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3275549-3276239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 75549-32 762 39 bp Feature: gene Location: 3276631-3276882 bp Feature: gene Location: 3277249-3277491 bp Ori: QAW62423.1 Feature: domain Description: DinI Location: 3277300-3277480 bp Feature: domain Description: DinI Location: 32 77300-32 77480 bp Feature: gene Location: 3346213-3346503 bp Feature: gene Location: 3346515-3346748 bp Ori: QAW62495.1 Feature: domain Description: PRK10597 Location: 3346518-3346743 bp Feature: domain Description: PRK10597 Location: 3346518-3346743 bp Feature: gene Location: 3346827-3348311 bp Ori: QAW62496.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3347229-3347919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33472 2 9-3347919 bp Feature: gene Location: 3348311-3348562 bp Feature: gene Location: 3349152-3350513 bp Ori: QAW62498.1 Feature: domain Description: PRK05318 Location: 3349176-3350475 bp Feature: domain Description: PRK05318 Location: 3349176-3350475 bp Feature: gene Location: 3665527-3665832 bp Ori: QAW62784.1 Feature: domain Description: DinI Location: 3665641-3665827 bp Feature: domain Description: DinI Location: 3665641-366582 7 bp Feature: gene Location: 3665771-3665959 bp Feature: gene Location: 3666060-3667544 bp Ori: QAW62785.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3666462-3667152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3666462 -3667152 bp Feature: gene Location: 3667544-3667795 bp Feature: gene Location: 3668023-3670437 bp Ori: QAW62787.1 Feature: domain Description: Phage_GPA Location: 3668587-3669553 bp Feature: domain Description: Phage_GPA Location: 3668587-3669553 bp Feature: gene Location: 3673238-3674116 bp Ori: QAW64609.1 Feature: domain Description: Phage_CI_repr Location: 3673265-3673448 bp Feature: domain Description: Phage_CI_repr Location: 36732 65-3673448 bp Feature: domain Description: Phage_CI_repr Location: 3673577-3673769 bp Feature: domain Description: Phage_CI_repr Location: 3673577-3673769 bp Feature: domain Description: Phage_CI_C Location: 3673796-3674090 bp Feature: domain Description: Phage_CI_C Location: 3673796-3674090 bp Feature: gene Location: 3674128-3675072 bp Feature: gene Location: 3675171-3676655 bp Ori: QAW62796.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3675573-3676263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3675573-36762 63 bp Feature: gene Location: 3676655-3676906 bp Feature: gene Location: 3677074-3678126 bp Ori: QAW62798.1 Feature: domain Description: int Location: 3677077-3678076 bp Feature: domain Description: int Location: 3677077-3678076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP026135.1 Klebsiella pneumoniae strain F5 plasmid pF5_3, complete sequence (161567 bp)
Overview 1 RT 1: 71086-74202 bp Neighborhood of RT #1 [71086, 74202] PRK10276 RVT-GII Feature: gene Location: 71086-71511 bp Ori: QAW64988.1 Feature: domain Description: PRK10276 Location: 71089-71497 bp Feature: domain Description: PRK10276 Location: 71089-71497 bp Feature: gene Location: 71666-71917 bp Feature: gene Location: 71917-73401 bp Ori: QAW64990.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72319-73009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723 19-73 009 bp Feature: gene Location: 73635-73865 bp Feature: gene Location: 73924-74202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP026133.1 Klebsiella pneumoniae strain F5 plasmid pF5_1, complete sequence (105124 bp)
Overview 1 RT 1: 33469-37671 bp Neighborhood of RT #1 [33469, 37688] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 33469-34140 bp Ori: QAW64735.1 Feature: domain Description: Plasmid_stab_B Location: 33484-33691 bp Feature: domain Description: Plasmid_stab_B Location: 334 84 -33691 bp Feature: domain Description: Plasmid_stab_B Location: 33796-34003 bp Feature: domain Description: Plasmid_stab_B Location: 33796-34 003 bp Feature: gene Location: 34143-35114 bp Ori: QAW64736.1 Feature: domain Description: StbA Location: 34146-35091 bp Feature: domain Description: StbA Location: 34 14 6-35091 bp Feature: gene Location: 35363-36847 bp Ori: QAW64737.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35765-36455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35765-364 55 bp Feature: gene Location: 36847-37098 bp Feature: gene Location: 37257-37688 bp Ori: QAW64739.1 Feature: domain Description: PRK10276 Location: 37308-37671 bp Feature: domain Description: PRK10276 Location: 37308-37671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)