myRT

myRT report for GCA_004120075.1_ASM412007v1

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Seq: CP026148.1 Klebsiella pneumoniae strain F132 plasmid pF132_3, complete sequence (86589 bp)
Overview 1 RT 1: 17975-21091 bp Neighborhood of RT #1 [17975, 21091] PRK10276 RVT-GII Feature: gene Location: 17975-18400 bp Ori: QAW81777.1 Feature: domain Description: PRK10276 Location: 17978-18386 bp Feature: domain Description: PRK1 0276 Location: 1 7978-1 8386 bp Feature: gene Location: 18555-18806 bp Feature: gene Location: 18806-20290 bp Ori: QAW81779.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19208-19898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9208-1 9898 bp Feature: gene Location: 20524-20754 bp Feature: gene Location: 20813-21091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP026145.1 Klebsiella pneumoniae strain F132 chromosome, complete genome (5511250 bp)
Overview 1 RT 1: 1215790-1220675 bp 2 RT 2: 1379827-1382603 bp 3 RT 3: 1831784-1836655 bp 4 RT 4: 1852396-1858658 bp 5 RT 5: 3104733-3108871 bp 6 RT 6: 3256019-3260118 bp 7 RT 7: 3328849-3333111 bp 8 RT 8: 3648154-3651592 bp Neighborhood of RT #1 [1215790, 1220680] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1379827, 1382603] RVT-GII Neighborhood of RT #3 [1831784, 1836669] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [1852396, 1858658] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3104733, 3108871] umuC PRK10276 RVT-GII Neighborhood of RT #6 [3256019, 3260129] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3328849, 3333149] PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [3648154, 3651642] DinI RVT-GII int Feature: gene Location: 1215790-1218174 bp Ori: QAW77522.1 Feature: domain Description: Phage_GPA Location: 1216354-1217320 bp Feature: domain Description: Phage_GPA Location: 12 16354-12 1732 0 bp Feature: gene Location: 1218404-1218655 bp Feature: gene Location: 1218655-1220139 bp Ori: QAW77524.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1219057-1219747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 19057-12 19747 bp Feature: gene Location: 1220247-1220435 bp Feature: gene Location: 1220447-1220680 bp Ori: QAW77526.1 Feature: domain Description: DinI Location: 1220492-1220675 bp Feature: domain Description: DinI Location: 12 2 0492 -12 2 0675 bp Feature: gene Location: 1379827-1380030 bp Feature: gene Location: 1380023-1380361 bp Feature: gene Location: 1380458-1381942 bp Ori: QAW77681.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1380860-1381550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1380860-1381550 bp Feature: gene Location: 1381942-1382193 bp Feature: gene Location: 1382346-1382603 bp Feature: gene Location: 1831784-1832953 bp Ori: QAW78051.1 Feature: domain Description: dacD Location: 1831793-1832948 bp Feature: domain Description: dacD Location: 1831793-1832 948 bp Feature: gene Location: 1833223-1833474 bp Feature: gene Location: 1833474-1834957 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833876-1834488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833876-1834488 bp Feature: gene Location: 1835039-1835512 bp Ori: QAW78053.1 Feature: domain Description: PRK10016 Location: 1835042-1835501 bp Feature: domain Description: PRK10016 Location: 1835042 -1835501 bp Feature: gene Location: 1835611-1836669 bp Ori: QAW78054.1 Feature: domain Description: YccC Location: 1835617-1836655 bp Feature: domain Description: YccC Location: 1835617-1836655 bp Feature: gene Location: 1852396-1853499 bp Ori: QAW78074.1 Feature: domain Description: STKc_PknB_like Location: 1852528-1852969 bp Feature: domain Description: STKc_PknB_like Location: 1852 52 8-1852 969 bp Feature: gene Location: 1853569-1853811 bp Feature: gene Location: 1854058-1855158 bp Ori: QAW78075.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1854241-1854769 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18542 41-1854769 bp Feature: gene Location: 1855273-1857549 bp Ori: QAW78076.1 Feature: domain Description: AAA_15 Location: 1855306-1856314 bp Feature: domain Description: AAA_15 Location: 1855306-1856314 bp Feature: gene Location: 1858428-1858658 bp Feature: gene Location: 3104733-3105998 bp Ori: QAW79222.1 Feature: domain Description: umuC Location: 3104736-3105996 bp Feature: domain Description: umuC Location: 3104736-3105996 bp Feature: gene Location: 3106000-3106419 bp Ori: QAW79223.1 Feature: domain Description: PRK10276 Location: 3106003-3106414 bp Feature: domain Description: PRK102 76 Location: 3106003-3106414 bp Feature: gene Location: 3106499-3107983 bp Ori: QAW79224.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3106901-3107591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3106901-3107591 bp Feature: gene Location: 3107983-3108234 bp Feature: gene Location: 3108782-3108871 bp Feature: gene Location: 3256019-3257284 bp Ori: QAW79367.1 Feature: domain Description: umuC Location: 3256022-3257282 bp Feature: domain Description: umuC Location: 32 5602 2 -32 572 82 bp Feature: gene Location: 3257287-3257706 bp Ori: QAW79368.1 Feature: domain Description: PRK10276 Location: 3257290-3257701 bp Feature: domain Description: PRK102 76 Location: 32 572 90-32 57701 bp Feature: gene Location: 3257785-3259269 bp Ori: QAW79369.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3258187-3258877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 58187-32 58877 bp Feature: gene Location: 3259269-3259520 bp Feature: gene Location: 3259887-3260129 bp Ori: QAW79371.1 Feature: domain Description: DinI Location: 3259938-3260118 bp Feature: domain Description: DinI Location: 32 59938-32 60118 bp Feature: gene Location: 3328849-3329139 bp Feature: gene Location: 3329151-3329384 bp Ori: QAW79441.1 Feature: domain Description: PRK10597 Location: 3329154-3329379 bp Feature: domain Description: PRK10597 Location: 332 9154-332 9379 bp Feature: gene Location: 3329463-3330947 bp Ori: QAW79442.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3329865-3330555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 9865-3330555 bp Feature: gene Location: 3330947-3331198 bp Feature: gene Location: 3331788-3333149 bp Ori: QAW79444.1 Feature: domain Description: PRK05318 Location: 3331812-3333111 bp Feature: domain Description: PRK05318 Location: 3331812 -3333111 bp Feature: gene Location: 3648154-3648459 bp Ori: QAW79724.1 Feature: domain Description: DinI Location: 3648268-3648454 bp Feature: domain Description: DinI Location: 36482 68-3648454 bp Feature: gene Location: 3648398-3648586 bp Feature: gene Location: 3648687-3650171 bp Ori: QAW79725.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649089-3649779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649089-3649779 bp Feature: gene Location: 3650171-3650422 bp Feature: gene Location: 3650590-3651642 bp Ori: QAW79727.1 Feature: domain Description: int Location: 3650593-3651592 bp Feature: domain Description: int Location: 3650593-3651592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), int (PHA02601)

Seq: CP026146.1 Klebsiella pneumoniae strain F132 plasmid pF132_1, complete sequence (113265 bp)
Overview 1 RT 1: 107473-111500 bp Neighborhood of RT #1 [107473, 111517] INT_P4_C RVT-GII YafO_toxin Feature: gene Location: 107473-107853 bp Feature: gene Location: 107848-108948 bp Ori: QAW81682.1 Feature: domain Description: INT_P4_C Location: 108307-108853 bp Feature: domain Description: INT_P4_C Location: 1083 07-108853 bp Feature: gene Location: 109035-110519 bp Ori: QAW81683.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109437-110127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10943 7-110127 bp Feature: gene Location: 110519-110770 bp Feature: gene Location: 111107-111517 bp Ori: QAW81685.1 Feature: domain Description: YafO_toxin Location: 111215-111500 bp Feature: domain Description: YafO_toxin Location: 111215-111500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, YafO_toxin (pfam13957)