myRT

myRT report for GCA_004120095.1_ASM412009v1

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Seq: CP026152.1 Klebsiella pneumoniae strain F138 plasmid pF138_3, complete sequence (83260 bp)
Overview 1 RT 1: 29569-33651 bp Neighborhood of RT #1 [29569, 33788] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 29569-30000 bp Ori: QAW87503.1 Feature: domain Description: PRK10276 Location: 29620-29983 bp Feature: domain Description: PRK1 0276 Location: 29620-29983 bp Feature: gene Location: 30159-30410 bp Feature: gene Location: 30410-31894 bp Ori: QAW87505.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30812-31502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3081 2-31 502 bp Feature: gene Location: 32143-33114 bp Ori: QAW87506.1 Feature: domain Description: StbA Location: 32146-33091 bp Feature: domain Description: StbA Location: 321 46-33091 bp Feature: gene Location: 33117-33788 bp Ori: QAW87507.1 Feature: domain Description: Plasmid_stab_B Location: 33132-33339 bp Feature: domain Description: Plasmid_stab_B Location: 331 32-33339 bp Feature: domain Description: Plasmid_stab_B Location: 33444-33651 bp Feature: domain Description: Plasmid_stab_B Location: 33444-33651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP026151.1 Klebsiella pneumoniae strain F138 plasmid pF138_2, complete sequence (146984 bp)
Overview 1 RT 1: 39565-42667 bp Neighborhood of RT #1 [39565, 42681] RVT-GII PRK10276 Feature: gene Location: 39565-39843 bp Feature: gene Location: 39902-40132 bp Feature: gene Location: 40366-41850 bp Ori: QAW87384.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40768-41458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40768-41458 bp Feature: gene Location: 41850-42101 bp Feature: gene Location: 42256-42681 bp Ori: QAW87386.1 Feature: domain Description: PRK10276 Location: 42259-42667 bp Feature: domain Description: PRK102 76 Location: 42 2 59-42 667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP026150.1 Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence (112458 bp)
Overview 1 RT 1: 90534-94561 bp Neighborhood of RT #1 [90534, 94578] INT_P4_C RVT-GII YafO_toxin Feature: gene Location: 90534-90914 bp Feature: gene Location: 90909-92009 bp Ori: QAW87310.1 Feature: domain Description: INT_P4_C Location: 91368-91914 bp Feature: domain Description: INT_P4_C Location: 913 68-91914 bp Feature: gene Location: 92096-93580 bp Ori: QAW87311.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92498-93188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92498-93 188 bp Feature: gene Location: 93580-93831 bp Feature: gene Location: 94168-94578 bp Ori: QAW87313.1 Feature: domain Description: YafO_toxin Location: 94276-94561 bp Feature: domain Description: YafO_toxin Location: 94276-94561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, YafO_toxin (pfam13957)

Seq: CP026149.1 Klebsiella pneumoniae strain F138 chromosome, complete genome (5539281 bp)
Overview 1 RT 1: 1232672-1237557 bp 2 RT 2: 1396714-1399490 bp 3 RT 3: 1848682-1853553 bp 4 RT 4: 1869294-1875556 bp 5 RT 5: 3046178-3048686 bp 6 RT 6: 3125861-3129999 bp 7 RT 7: 3277152-3281251 bp 8 RT 8: 3349984-3354246 bp 9 RT 9: 3675100-3679938 bp Neighborhood of RT #1 [1232672, 1237562] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1396714, 1399490] RVT-GII Neighborhood of RT #3 [1848682, 1853567] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [1869294, 1875556] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #5 [3046178, 3048686] RVT-GII Neighborhood of RT #6 [3125861, 3129999] umuC PRK10276 RVT-GII Neighborhood of RT #7 [3277152, 3281262] umuC PRK10276 RVT-GII DinI Neighborhood of RT #8 [3349984, 3354284] PRK10597 RVT-GII PRK05318 Neighborhood of RT #9 [3675100, 3679988] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1232672-1235056 bp Ori: QAW83054.1 Feature: domain Description: Phage_GPA Location: 1233236-1234202 bp Feature: domain Description: Phage_GPA Location: 1233236-1234 202 bp Feature: gene Location: 1235286-1235537 bp Feature: gene Location: 1235537-1237021 bp Ori: QAW83056.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235939-1236629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235939-1236629 bp Feature: gene Location: 1237129-1237317 bp Feature: gene Location: 1237329-1237562 bp Ori: QAW83058.1 Feature: domain Description: DinI Location: 1237374-1237557 bp Feature: domain Description: DinI Location: 1237374 -1237557 bp Feature: gene Location: 1396714-1396917 bp Feature: gene Location: 1396910-1397248 bp Feature: gene Location: 1397345-1398829 bp Ori: QAW83217.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1397747-1398437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139774 7-13984 37 bp Feature: gene Location: 1398829-1399080 bp Feature: gene Location: 1399233-1399490 bp Feature: gene Location: 1848682-1849851 bp Ori: QAW83598.1 Feature: domain Description: dacD Location: 1848691-1849846 bp Feature: domain Description: dacD Location: 184 8691-184 984 6 bp Feature: gene Location: 1850120-1850371 bp Feature: gene Location: 1850371-1851855 bp Ori: QAW83600.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850773-1851463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850773-18514 63 bp Feature: gene Location: 1851937-1852410 bp Ori: QAW83601.1 Feature: domain Description: PRK10016 Location: 1851940-1852399 bp Feature: domain Description: PRK10016 Location: 185194 0-1852399 bp Feature: gene Location: 1852509-1853567 bp Ori: QAW83602.1 Feature: domain Description: YccC Location: 1852515-1853553 bp Feature: domain Description: YccC Location: 1852515-1853553 bp Feature: gene Location: 1869294-1870397 bp Ori: QAW83622.1 Feature: domain Description: STKc_PknB_like Location: 1869426-1869867 bp Feature: domain Description: STKc_PknB_like Location: 18694 26-1869867 bp Feature: gene Location: 1870467-1870709 bp Feature: gene Location: 1870956-1872056 bp Ori: QAW83623.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1871139-1871667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1871139-1871667 bp Feature: gene Location: 1872171-1874447 bp Ori: QAW83624.1 Feature: domain Description: AAA_15 Location: 1872204-1873212 bp Feature: domain Description: AAA_15 Location: 1872204 -1873212 bp Feature: gene Location: 1875326-1875556 bp Feature: gene Location: 3046178-3046462 bp Feature: gene Location: 3046476-3046547 bp Feature: gene Location: 3046540-3048024 bp Ori: QAW84704.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3046942-3047632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304 694 2-304 7632 bp Feature: gene Location: 3048024-3048275 bp Feature: gene Location: 3048477-3048686 bp Feature: gene Location: 3125861-3127126 bp Ori: QAW84796.1 Feature: domain Description: umuC Location: 3125864-3127124 bp Feature: domain Description: umuC Location: 3125864 -3127124 bp Feature: gene Location: 3127128-3127547 bp Ori: QAW84797.1 Feature: domain Description: PRK10276 Location: 3127131-3127542 bp Feature: domain Description: PRK10276 Location: 3127131-312754 2 bp Feature: gene Location: 3127627-3129111 bp Ori: QAW84798.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3128029-3128719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3128029-3128719 bp Feature: gene Location: 3129111-3129362 bp Feature: gene Location: 3129910-3129999 bp Feature: gene Location: 3277152-3278417 bp Ori: QAW84943.1 Feature: domain Description: umuC Location: 3277155-3278415 bp Feature: domain Description: umuC Location: 3277155-32784 15 bp Feature: gene Location: 3278420-3278839 bp Ori: QAW84944.1 Feature: domain Description: PRK10276 Location: 3278423-3278834 bp Feature: domain Description: PRK10276 Location: 32784 23-3278834 bp Feature: gene Location: 3278918-3280402 bp Ori: QAW84945.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279320-3280010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279320-3280010 bp Feature: gene Location: 3280402-3280653 bp Feature: gene Location: 3281020-3281262 bp Ori: QAW84947.1 Feature: domain Description: DinI Location: 3281071-3281251 bp Feature: domain Description: DinI Location: 3281071-3281251 bp Feature: gene Location: 3349984-3350274 bp Feature: gene Location: 3350286-3350519 bp Ori: QAW85019.1 Feature: domain Description: PRK10597 Location: 3350289-3350514 bp Feature: domain Description: PRK10597 Location: 3350289-3350514 bp Feature: gene Location: 3350598-3352082 bp Ori: QAW85020.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3351000-3351690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3351000-3351690 bp Feature: gene Location: 3352082-3352333 bp Feature: gene Location: 3352923-3354284 bp Ori: QAW85022.1 Feature: domain Description: PRK05318 Location: 3352947-3354246 bp Feature: domain Description: PRK05318 Location: 335294 7-3354 24 6 bp Feature: gene Location: 3675100-3675978 bp Ori: QAW85320.1 Feature: domain Description: Phage_CI_repr Location: 3675127-3675310 bp Feature: domain Description: Phage_CI_repr Location: 3675127-3675310 bp Feature: domain Description: Phage_CI_repr Location: 3675439-3675631 bp Feature: domain Description: Phage_CI_repr Location: 36754 39-3675631 bp Feature: domain Description: Phage_CI_C Location: 3675658-3675952 bp Feature: domain Description: Phage_CI_C Location: 3675658-3675952 bp Feature: gene Location: 3675990-3676934 bp Feature: gene Location: 3677033-3678517 bp Ori: QAW85322.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677435-3678125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36774 35-3678125 bp Feature: gene Location: 3678517-3678768 bp Feature: gene Location: 3678936-3679988 bp Ori: QAW85324.1 Feature: domain Description: int Location: 3678939-3679938 bp Feature: domain Description: int Location: 3678939-3679938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)