myRT

myRT report for GCA_004124035.2_ASM412403v2

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Seq: CP033226.2 Salmonella enterica subsp. enterica strain CFSA122 chromosome, complete genome (4990577 bp)
Overview 1 RT 1: 694302-700472 bp 2 RT 2: 4979507-4985804 bp Neighborhood of RT #1 [694302, 700474] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [4979507, 4985866] PRK10216 PRK10473 RVT-Retrons PRK09692 Feature: gene Location: 694302-696002 bp Ori: QAX64232.2 Feature: domain Description: 5 Location: 695526-695820 bp Feature: domain Description: 5 Location: 695526-695820 bp Feature: gene Location: 696754-696939 bp Feature: gene Location: 696909-697673 bp Ori: QAX64234.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 697032-697485 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 697032-697485 bp Feature: gene Location: 697997-698503 bp Ori: QAX64235.1 Feature: domain Description: PRK10201 Location: 698000-698498 bp Feature: domain Description: PRK1 0201 Location: 698000-698498 bp Feature: gene Location: 698627-700474 bp Ori: QAX68266.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 698633-700472 bp Feature: domain Description: PRK05658 Location: 698633-700472 bp Feature: gene Location: 4979507-4980466 bp Ori: QAX68227.1 Gene: yidZ Feature: domain Description: PRK10216 Location: 4979510-4980461 bp Feature: domain Description: PRK1 021 6 Location: 497951 0-4980461 bp Feature: gene Location: 4980435-4981622 bp Ori: QAX68228.1 Feature: domain Description: PRK10473 Location: 4980438-4981614 bp Feature: domain Description: PRK1 0473 Location: 4980438-4981 61 4 bp Feature: gene Location: 4982424-4983293 bp Ori: QAX68450.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4982469-4983054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4982469-4983054 bp Feature: gene Location: 4983359-4984321 bp Feature: gene Location: 4984646-4985866 bp Feature: domain Description: PRK09692 Location: 4984655-4985804 bp Feature: domain Description: PRK09692 Location: 4984655-4985804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons, PRK09692 (Integrase; provisional)