myRT

myRT report for GCA_004124055.2_ASM412405v2

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Seq: CP033257.2 Salmonella enterica subsp. enterica strain CFSA12 chromosome, complete genome (4991162 bp)
Overview 1 RT 1: 694571-700741 bp 2 RT 2: 4980162-4986459 bp Neighborhood of RT #1 [694571, 700743] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [4980162, 4986521] PRK10216 PRK10473 RVT-Retrons PRK09692 Feature: gene Location: 694571-696271 bp Ori: QAX54045.2 Feature: domain Description: 5 Location: 695795-696089 bp Feature: domain Description: 5 Location: 695795-696089 bp Feature: gene Location: 697023-697208 bp Feature: gene Location: 697178-697942 bp Ori: QAX54047.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 697301-697754 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 697301 -697754 bp Feature: gene Location: 698266-698772 bp Ori: QAX54048.1 Feature: domain Description: PRK10201 Location: 698269-698767 bp Feature: domain Description: PRK1 0201 Location: 698269-698767 bp Feature: gene Location: 698896-700743 bp Ori: QAX58078.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 698902-700741 bp Feature: domain Description: PRK05658 Location: 698902-700741 bp Feature: gene Location: 4980162-4981121 bp Ori: QAX58039.1 Gene: yidZ Feature: domain Description: PRK10216 Location: 4980165-4981116 bp Feature: domain Description: PRK1 021 6 Location: 49801 65-4981 1 1 6 bp Feature: gene Location: 4981090-4982277 bp Ori: QAX58040.1 Feature: domain Description: PRK10473 Location: 4981093-4982269 bp Feature: domain Description: PRK1 0473 Location: 4981 093-4982269 bp Feature: gene Location: 4983079-4983948 bp Ori: QAX58263.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4983124-4983709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49831 24-4983709 bp Feature: gene Location: 4984014-4984976 bp Feature: gene Location: 4985301-4986521 bp Feature: domain Description: PRK09692 Location: 4985310-4986459 bp Feature: domain Description: PRK09692 Location: 498531 0-4986459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons, PRK09692 (Integrase; provisional)