myRT

myRT report for GCA_004124195.2_ASM412419v2

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Seq: CP033350.2 Salmonella enterica subsp. enterica strain CFSA231 chromosome, complete genome (4834516 bp)
Overview 1 RT 1: 4298938-4305299 bp Neighborhood of RT #1 [4298938, 4305304] YjeJ DUF4156 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 4298938-4299795 bp Ori: QAX47850.1 Feature: domain Description: YjeJ Location: 4298941-4299784 bp Feature: domain Description: YjeJ Location: 4298941 -4299784 bp Feature: gene Location: 4299843-4300196 bp Ori: QAX47851.1 Feature: domain Description: DUF4156 Location: 4299912-4300188 bp Feature: domain Description: DUF41 56 Location: 429991 2-43001 88 bp Feature: gene Location: 4300530-4302227 bp Ori: QAX47852.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4300593-4300827 bp Feature: domain Description: RVT_N Location: 4300593-4300827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300881-4301526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300881 -4301 526 bp Feature: domain Description: GIIM Note: maturase Location: 4301580-4301811 bp Feature: domain Description: GIIM Note: maturase Location: 4301 580-4301 81 1 bp Feature: domain Description: HNHc Note: nucleases Location: 4302021-4302183 bp Feature: domain Description: HNHc Note: nucleases Location: 4302021 -43021 83 bp Feature: gene Location: 4303321-4304967 bp Ori: QAX47853.1 Gene: groL Feature: domain Description: groEL Location: 4303327-4304953 bp Feature: domain Description: groEL Location: 4303327-4304953 bp Feature: gene Location: 4305011-4305304 bp Ori: QAX47854.1 Gene: groES Feature: domain Description: groES Location: 4305014-4305299 bp Feature: domain Description: groES Location: 430501 4-4305299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjeJ (pfam15922), DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)