myRT

myRT report for GCA_004124235.1_ASM412423v1

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Seq: CP032487.1 Yersinia sp. CFS1934 chromosome, complete genome (4742939 bp)
Overview 1 RT 1: 3796005-3800585 bp 2 RT 2: 4518922-4526201 bp Neighborhood of RT #1 [3796005, 3800686] YbjD KOG3396 RVT-GII GIIM DUF1281 DUF1281_C Neighborhood of RT #2 [4518922, 4526845] DUF4387 GltP RVT-GII GIIM PHA02517 IAT_beta Big_1 Big_1 Big_1 Big_1 Big_1 Big_1 Big_1 Feature: gene Location: 3796005-3797657 bp Ori: QAX80260.1 Feature: domain Description: YbjD Location: 3796008-3797355 bp Feature: domain Description: YbjD Location: 3796008-3797355 bp Feature: gene Location: 3798169-3798351 bp Feature: domain Description: KOG3396 Location: 3798181-3798286 bp Feature: domain Description: KOG3396 Location: 37981 81 -3798286 bp Feature: gene Location: 3798447-3799205 bp Ori: QAX80261.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3798462-3798690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3798462-3798690 bp Feature: domain Description: GIIM Note: maturase Location: 3798747-3798975 bp Feature: domain Description: GIIM Note: maturase Location: 3798747-3798975 bp Feature: gene Location: 3799399-3799758 bp Feature: gene Location: 3799760-3800686 bp Ori: QAX80263.1 Feature: domain Description: DUF1281 Location: 3799850-3800381 bp Feature: domain Description: DUF1 281 Location: 3799850-3800381 bp Feature: domain Description: DUF1281_C Location: 3800387-3800585 bp Feature: domain Description: DUF1 281 _C Location: 3800387-3800585 bp Feature: gene Location: 4518922-4519239 bp Ori: QAX80850.1 Feature: domain Description: DUF4387 Location: 4518940-4519228 bp Feature: domain Description: DUF4387 Location: 451 8940-451 9228 bp Feature: gene Location: 4519411-4520736 bp Ori: QAX80851.1 Feature: domain Description: GltP Location: 4519420-4520629 bp Feature: domain Description: GltP Location: 451 9420-4520629 bp Feature: gene Location: 4521413-4522222 bp Ori: QAX80852.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4521494-4521704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4521 494-4521 704 bp Feature: domain Description: GIIM Note: maturase Location: 4521779-4522004 bp Feature: domain Description: GIIM Note: maturase Location: 4521 779-4522004 bp Feature: gene Location: 4522303-4522437 bp Feature: domain Description: PHA02517 Location: 4522306-4522438 bp Feature: domain Description: PHA0251 7 Location: 4522306-4522438 bp Feature: gene Location: 4522595-4526845 bp Ori: QAX80853.1 Feature: domain Description: IAT_beta Location: 4523042-4523849 bp Feature: domain Description: IAT_beta Location: 4523042-4523849 bp Feature: domain Description: Big_1 Location: 4524224-4524416 bp Feature: domain Description: Big_1 Location: 4524224-452441 6 bp Feature: domain Description: Big_1 Location: 4524524-4524716 bp Feature: domain Description: Big_1 Location: 4524524-452471 6 bp Feature: domain Description: Big_1 Location: 4524824-4525016 bp Feature: domain Description: Big_1 Location: 4524824-452501 6 bp Feature: domain Description: Big_1 Location: 4525124-4525316 bp Feature: domain Description: Big_1 Location: 45251 24-452531 6 bp Feature: domain Description: Big_1 Location: 4525424-4525616 bp Feature: domain Description: Big_1 Location: 4525424-452561 6 bp Feature: domain Description: Big_1 Location: 4525724-4525916 bp Feature: domain Description: Big_1 Location: 4525724-452591 6 bp Feature: domain Description: Big_1 Location: 4526009-4526201 bp Feature: domain Description: Big_1 Location: 4526009-4526201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), KOG3396 (KOG3396, Glucosamine-phosphate N-acetyltransferase ), RVT-GII, GIIM (pfam08388), DUF1281 (pfam06924), DUF1281_C (pfam18406), DUF4387 (pfam14330), GltP (COG1301), PHA02517 (putative transposase OrfB; Reviewed), IAT_beta (pfam11924)
Big_1 (pfam02369)

Seq: CP032488.1 Yersinia sp. CFS1934 plasmid pCFS1934, complete sequence (60496 bp)
Overview 1 RT 1: 8266-12084 bp Neighborhood of RT #1 [8266, 12084] RVT-DGRs InsA Feature: gene Location: 8266-9429 bp Feature: gene Location: 9568-10035 bp Feature: gene Location: 10380-11600 bp Ori: QAX81325.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10524-11286 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1052 4-112 86 bp Feature: gene Location: 12084-12342 bp Ori: QAX81326.1 Feature: domain Description: InsA Location: 12087-12342 bp Feature: domain Description: InsA Location: 12 087-12 342 bp Feature: gene Location: 11645-12084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, InsA (COG3677)