myRT

myRT report for GCA_004124275.1_ASM412427v1

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Seq: CP027218.1 Pseudomonas sp. DTU12.3 chromosome, complete genome (6268469 bp)
Overview 1 RT 1: 1128113-1132705 bp 2 RT 2: 3896291-3902300 bp Neighborhood of RT #1 [1128113, 1133199] InsE PHA02517 RVT-Retrons PIN_4 Neighborhood of RT #2 [3896291, 3902332] KOG1918 BID_2 RVT-UG4 PBP2_PotF agmatine_aguA Feature: gene Location: 1128113-1129246 bp Ori: QAX87664.1 Feature: domain Description: InsE Location: 1128137-1128329 bp Feature: domain Description: InsE Location: 1 1 281 37-1 1 28329 bp Feature: domain Description: PHA02517 Location: 1128428-1129202 bp Feature: domain Description: PHA0251 7 Location: 1 1 28428-1 1 29202 bp Feature: gene Location: 1129591-1130562 bp Feature: gene Location: 1130562-1131500 bp Ori: QAX83237.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1130664-1131258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 30664-1 1 31 258 bp Feature: gene Location: 1131688-1132014 bp Feature: gene Location: 1132345-1133199 bp Ori: QAX83239.1 Feature: domain Description: PIN_4 Location: 1132369-1132705 bp Feature: domain Description: PIN_4 Location: 1 1 32369-1 1 32705 bp Feature: gene Location: 3896291-3896908 bp Ori: QAX85553.1 Feature: domain Description: KOG1918 Location: 3896306-3896903 bp Feature: domain Description: KOG1 91 8 Location: 3896306-3896903 bp Feature: gene Location: 3897184-3899556 bp Ori: QAX85554.1 Feature: domain Description: BID_2 Location: 3899068-3899194 bp Feature: domain Description: BID_2 Location: 3899068-38991 94 bp Feature: gene Location: 3899664-3899963 bp Ori: QAX85555.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3899673-3899904 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3899673-3899904 bp Feature: gene Location: 3900108-3901205 bp Ori: QAX85556.1 Feature: domain Description: PBP2_PotF Location: 3900195-3901182 bp Feature: domain Description: PBP2_PotF Location: 39001 95-3901 1 82 bp Feature: gene Location: 3901208-3902332 bp Ori: QAX85557.1 Gene: aguA Feature: domain Description: agmatine_aguA Location: 3901229-3902300 bp Feature: domain Description: agmatine_aguA Location: 3901 229-3902300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-Retrons, PIN_4 (pfam13638), KOG1918 (KOG1918, 3-methyladenine DNA glycosidase ), BID_2 (smart00635), RVT-UG4, PBP2_PotF (cd13659), agmatine_aguA (TIGR03380)