myRT

myRT report for GCA_004135915.1_ASM413591v1

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Seq: CP035517.1 Escherichia coli strain U14A plasmid pU14A_A, complete sequence (149317 bp)
Overview 1 RT 1: 56736-60171 bp 2 RT 2: 71225-73574 bp Neighborhood of RT #1 [56736, 60236] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [71225, 73582] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 56736-57140 bp Ori: QAZ94043.1 Feature: domain Description: InsE Location: 56766-57102 bp Feature: domain Description: InsE Location: 56766-571 02 bp Feature: gene Location: 57169-57525 bp Ori: QAZ94044.1 Feature: domain Description: PHA02517 Location: 57172-57481 bp Feature: domain Description: PHA0251 7 Location: 571 72-57481 bp Feature: gene Location: 57642-59165 bp Ori: QAZ94045.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57915-58647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5791 5-58647 bp Feature: domain Description: GIIM Note: maturase Location: 58722-58920 bp Feature: domain Description: GIIM Note: maturase Location: 58722-58920 bp Feature: gene Location: 59459-59830 bp Feature: gene Location: 59757-60236 bp Ori: QAZ94047.1 Feature: domain Description: PHA02517 Location: 59817-60171 bp Feature: domain Description: PHA0251 7 Location: 5981 7-601 71 bp Feature: gene Location: 71225-71704 bp Ori: QAZ94064.1 Feature: domain Description: PHA02517 Location: 71285-71639 bp Feature: domain Description: PHA0251 7 Location: 71 285-71 639 bp Feature: gene Location: 71631-72002 bp Feature: gene Location: 72296-72799 bp Ori: QAZ94066.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72569-72641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72569-72641 bp Feature: gene Location: 72838-73158 bp Ori: QAZ94067.1 Gene: agp_1 Feature: domain Description: PRK10173 Location: 72841-73069 bp Feature: domain Description: PRK1 01 73 Location: 72841 -73069 bp Feature: gene Location: 73133-73582 bp Ori: QAZ94068.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 73136-73574 bp Feature: domain Description: PRK1 01 73 Location: 731 36-73574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: CP035516.1 Escherichia coli strain U14A chromosome, complete genome (5061272 bp)
Overview 1 RT 1: 1345083-1351425 bp 2 RT 2: 4690372-4695691 bp Neighborhood of RT #1 [1345083, 1351425] PRK11388 RVT-Retrons Neighborhood of RT #2 [4690372, 4695717] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 1345083-1347002 bp Ori: QAZ90515.1 Gene: dhaR Feature: domain Description: PRK11388 Location: 1345086-1346994 bp Feature: domain Description: PRK11388 Location: 1345086-1346994 bp Feature: gene Location: 1347484-1347723 bp Feature: gene Location: 1348294-1350051 bp Ori: QAZ90517.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1348438-1349056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1348438-1349056 bp Feature: gene Location: 1350073-1350240 bp Feature: gene Location: 1350298-1351425 bp Feature: gene Location: 4690372-4691601 bp Ori: QAZ93611.1 Gene: ypdA_2 Feature: domain Description: YesM Location: 4690852-4691593 bp Feature: domain Description: YesM Location: 4690852 -4691593 bp Feature: gene Location: 4691674-4691862 bp Feature: gene Location: 4692184-4692666 bp Ori: QAZ93613.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692193-4692433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692 193-4692 433 bp Feature: domain Description: GIIM Note: maturase Location: 4692481-4692661 bp Feature: domain Description: GIIM Note: maturase Location: 4692 481-4692 661 bp Feature: gene Location: 4692733-4693272 bp Ori: QAZ93614.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693063-4693141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693063-4693141 bp Feature: gene Location: 4693758-4694663 bp Feature: gene Location: 4694800-4695717 bp Ori: QAZ93616.1 Gene: cutD_3 Feature: domain Description: PFLE_PFLC Location: 4694836-4695691 bp Feature: domain Description: PFLE_PFLC Location: 4694836-4695691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)