myRT

myRT report for GCA_004138605.1_ASM413860v1

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Seq: CP032915.1 Enterobacter roggenkampii strain ECY546 plasmid pY546, complete sequence (208740 bp)
Overview 1 RT 1: 88166-92677 bp 2 RT 2: 166772-171291 bp Neighborhood of RT #1 [88166, 92751] ArsD PRK10141 RVT-GII KefB Neighborhood of RT #2 [166772, 171311] PHA02517 RVT-GII GIIM PHA02517 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 88166-88527 bp Gene: arsD Feature: domain Description: ArsD Location: 88169-88478 bp Feature: domain Description: ArsD Location: 881 69-88478 bp Feature: gene Location: 88577-88927 bp Ori: QBA36653.1 Feature: domain Description: PRK10141 Location: 88586-88925 bp Feature: domain Description: PRK1 01 41 Location: 88586-88925 bp Feature: gene Location: 89218-90702 bp Ori: QBA36654.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89620-90310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89620-9031 0 bp Feature: gene Location: 90702-90953 bp Feature: gene Location: 91552-92751 bp Ori: QBA36656.1 Feature: domain Description: KefB Location: 91558-92677 bp Feature: domain Description: KefB Location: 91 558-92677 bp Feature: gene Location: 166772-167113 bp Feature: domain Description: PHA02517 Location: 166778-167114 bp Feature: domain Description: PHA0251 7 Location: 1 66778-1 671 1 4 bp Feature: gene Location: 167082-167477 bp Feature: gene Location: 167767-169290 bp Ori: QBA36703.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168040-168772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 68040-1 68772 bp Feature: domain Description: GIIM Note: maturase Location: 168850-169045 bp Feature: domain Description: GIIM Note: maturase Location: 1 68850-1 69045 bp Feature: gene Location: 169371-169687 bp Feature: domain Description: PHA02517 Location: 169374-169620 bp Feature: domain Description: PHA0251 7 Location: 1 69374-1 69620 bp Feature: gene Location: 169722-171311 bp Ori: QBA36704.1 Feature: domain Description: LZ_Tnp_IS66 Location: 169881-170091 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 69881 -1 70091 bp Feature: domain Description: zf-IS66 Location: 170115-170247 bp Feature: domain Description: zf-IS66 Location: 1 701 1 5-1 70247 bp Feature: domain Description: DDE_Tnp_IS66 Location: 170292-171159 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 70292-1 71 1 59 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 171183-171291 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 71 1 83-1 71 291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArsD (pfam06953), PRK10141 (DNA-binding transcriptional repressor ArsR; Provisional), RVT-GII, KefB (COG0475), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: CP032916.1 Enterobacter roggenkampii strain ECY546 chromosome, complete genome (4787919 bp)
Overview 1 RT 1: 130061-133665 bp Neighborhood of RT #1 [130061, 133679] RVT-Retrons PRK10141 Feature: gene Location: 130061-130267 bp Feature: gene Location: 130362-130958 bp Feature: gene Location: 131043-131972 bp Ori: QBA36860.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131142-131727 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131142 -13172 7 bp Feature: gene Location: 132226-132891 bp Feature: gene Location: 133359-133679 bp Ori: QBA36861.1 Feature: domain Description: PRK10141 Location: 133362-133665 bp Feature: domain Description: PRK10141 Location: 133362 -133665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK10141 (DNA-binding transcriptional repressor ArsR; Provisional)