myRT

myRT report for GCA_004138665.1_ASM413866v1

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Seq: CP031562.1 Klebsiella pneumoniae strain 2-1 chromosome, complete genome (5230042 bp)
Overview 1 RT 1: 1539300-1543697 bp 2 RT 2: 1774155-1779027 bp 3 RT 3: 2969220-2973356 bp 4 RT 4: 3137622-3141721 bp 5 RT 5: 4127204-4134112 bp Neighborhood of RT #1 [1539300, 1543747] PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #2 [1774155, 1779041] dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [2969220, 2973356] umuC PRK10276 RVT-GII Neighborhood of RT #4 [3137622, 3141732] umuC PRK10276 RVT-GII DinI Neighborhood of RT #5 [4127204, 4134112] RVT-GII RVT-GII Feature: gene Location: 1539300-1539485 bp Ori: QBA32700.1 Feature: domain Description: PRK15440 Location: 1539303-1539450 bp Feature: domain Description: PRK1 5440 Location: 1 539303-1 539450 bp Feature: gene Location: 1539567-1539818 bp Feature: gene Location: 1539818-1541302 bp Ori: QBA32702.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540220-1540910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 540220-1 54091 0 bp Feature: gene Location: 1541360-1542415 bp Feature: domain Description: PRK15440 Location: 1541366-1542413 bp Feature: domain Description: PRK1 5440 Location: 1 541 366-1 54241 3 bp Feature: gene Location: 1542458-1543747 bp Ori: QBA32703.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 1542500-1543697 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 542500-1 543697 bp Feature: gene Location: 1774155-1775324 bp Ori: QBA32885.1 Gene: dacD Feature: domain Description: dacD Location: 1774164-1775319 bp Feature: domain Description: dacD Location: 1 7741 64-1 77531 9 bp Feature: gene Location: 1775594-1775845 bp Feature: gene Location: 1775845-1777329 bp Ori: QBA32887.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1776247-1776937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 776247-1 776937 bp Feature: gene Location: 1777411-1777884 bp Ori: QBA32888.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1777414-1777873 bp Feature: domain Description: PRK1 001 6 Location: 1 77741 4-1 777873 bp Feature: gene Location: 1777983-1779041 bp Ori: QBA32889.1 Feature: domain Description: YccC Location: 1777989-1779027 bp Feature: domain Description: YccC Location: 1 777989-1 779027 bp Feature: gene Location: 2969220-2970485 bp Ori: QBA33999.1 Gene: umuC Feature: domain Description: umuC Location: 2969223-2970480 bp Feature: domain Description: umuC Location: 2969223-2970480 bp Feature: gene Location: 2970487-2970906 bp Ori: QBA36144.1 Feature: domain Description: PRK10276 Location: 2970490-2970901 bp Feature: domain Description: PRK1 0276 Location: 2970490-2970901 bp Feature: gene Location: 2970986-2972470 bp Ori: QBA34000.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971388-2972078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971 388-2972078 bp Feature: gene Location: 2972470-2972721 bp Feature: gene Location: 2973267-2973356 bp Feature: gene Location: 3137622-3138887 bp Ori: QBA34176.1 Gene: umuC Feature: domain Description: umuC Location: 3137625-3138885 bp Feature: domain Description: umuC Location: 31 37625-31 38885 bp Feature: gene Location: 3138890-3139309 bp Ori: QBA34177.1 Feature: domain Description: PRK10276 Location: 3138893-3139304 bp Feature: domain Description: PRK1 0276 Location: 31 38893-31 39304 bp Feature: gene Location: 3139388-3140872 bp Ori: QBA34178.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3139790-3140480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 39790-31 40480 bp Feature: gene Location: 3140872-3141123 bp Feature: gene Location: 3141490-3141732 bp Ori: QBA34180.1 Feature: domain Description: DinI Location: 3141541-3141721 bp Feature: domain Description: DinI Location: 31 41 541 -31 41 721 bp Feature: gene Location: 4127204-4127998 bp Feature: gene Location: 4128135-4128536 bp Feature: gene Location: 4129103-4130587 bp Ori: QBA35068.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4129505-4130195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 29505-41 301 95 bp Feature: gene Location: 4130587-4130838 bp Feature: gene Location: 4131013-4132497 bp Ori: QBA35070.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4131415-4132105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 31 41 5-41 321 05 bp Feature: gene Location: 4132497-4132748 bp Feature: gene Location: 4133297-4134112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15440 (L-rhamnonate dehydratase; Provisional), RVT-GII, MFS_ExuT_GudP_like (cd17319), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183)

Seq: CP031563.1 Klebsiella pneumoniae strain 2-1 plasmid pKP21HI1, complete sequence (245534 bp)
Overview 1 RT 1: 237160-241019 bp Neighborhood of RT #1 [237160, 241019] HHA RVT-GII INT_Cre_C Feature: gene Location: 237160-237414 bp Ori: QBA36444.1 Feature: domain Description: HHA Location: 237211-237394 bp Feature: domain Description: HHA Location: 2 372 11-2 37394 bp Feature: gene Location: 237546-237797 bp Feature: gene Location: 237930-239414 bp Ori: QBA36445.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238332-239022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 38332 -2 3902 2 bp Feature: gene Location: 239500-240636 bp Ori: QBA36446.1 Feature: domain Description: INT_Cre_C Location: 239923-240577 bp Feature: domain Description: INT_Cre_C Location: 2 3992 3-2 40577 bp Feature: gene Location: 240702-241019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)