myRT

myRT report for GCA_004141975.1_ASM414197v1

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Seq: CP035540.1 Klebsiella pneumoniae subsp. pneumoniae strain CCRI-21711 chromosome, complete genome (5299449 bp)
Overview 1 RT 1: 1729623-1735741 bp 2 RT 2: 1768465-1774936 bp 3 RT 3: 2918801-2922452 bp 4 RT 4: 3001237-3009593 bp 5 RT 5: 3137634-3146818 bp 6 RT 6: 3478154-3483841 bp 7 RT 7: 3486755-3491419 bp 8 RT 8: 3929934-3933386 bp Neighborhood of RT #1 [1729623, 1736022] PRK10124 GT4_MtfB-like RVT-GII Acyl_transf_3 GT4_WbaZ-like Neighborhood of RT #2 [1768465, 1774950] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [2918801, 2922508] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #4 [3001237, 3009593] umuC PRK10276 RVT-GII RVT-GII Rve Neighborhood of RT #5 [3137634, 3146871] umuC PRK10276 RVT-GII RVT-GII RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #6 [3478154, 3483918] DinI RVT-GII Phage_GPA dam Neighborhood of RT #7 [3486755, 3491439] RVT-GII int YbjK Neighborhood of RT #8 [3929934, 3933442] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1729623-1731020 bp Ori: QBA59751.1 Gene: wbaP Feature: domain Description: PRK10124 Location: 1729635-1731018 bp Feature: domain Description: PRK1 01 24 Location: 1 729635-1 731 01 8 bp Feature: gene Location: 1731037-1732029 bp Ori: QBA59752.1 Feature: domain Description: GT4_MtfB-like Location: 1731196-1731997 bp Feature: domain Description: GT4_MtfB-like Location: 1 731 1 96-1 731 997 bp Feature: gene Location: 1732399-1733886 bp Ori: QBA59753.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1732804-1733494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 732804-1 733494 bp Feature: gene Location: 1733991-1734989 bp Ori: QBA59754.1 Feature: domain Description: Acyl_transf_3 Location: 1734006-1734945 bp Feature: domain Description: Acyl_transf_3 Location: 1 734006-1 734945 bp Feature: gene Location: 1735009-1736022 bp Ori: QBA59755.1 Feature: domain Description: GT4_WbaZ-like Location: 1735381-1735741 bp Feature: domain Description: GT4_WbaZ-like Location: 1 735381 -1 735741 bp Feature: gene Location: 1768465-1769889 bp Ori: QBA59782.1 Gene: sbcB Feature: domain Description: SbcB Location: 1768471-1769887 bp Feature: domain Description: SbcB Location: 1 768471 -1 769887 bp Feature: gene Location: 1770070-1771233 bp Ori: QBA59783.1 Gene: dacD Feature: domain Description: dacD Location: 1770073-1771228 bp Feature: domain Description: dacD Location: 1 770073-1 771 228 bp Feature: gene Location: 1771751-1773238 bp Ori: QBA59784.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772156-1772846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7721 56-1 772846 bp Feature: gene Location: 1773320-1773793 bp Ori: QBA59785.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1773323-1773782 bp Feature: domain Description: PRK1 001 6 Location: 1 773323-1 773782 bp Feature: gene Location: 1773892-1774950 bp Ori: QBA59786.1 Gene: yeeA Feature: domain Description: YccC Location: 1773898-1774936 bp Feature: domain Description: YccC Location: 1 773898-1 774936 bp Feature: gene Location: 2918801-2919049 bp Ori: QBA60884.1 Gene: dinI_4 Feature: domain Description: PRK10597 Location: 2918804-2919044 bp Feature: domain Description: PRK1 0597 Location: 291 8804-291 9044 bp Feature: gene Location: 2919272-2919556 bp Feature: gene Location: 2919634-2921121 bp Ori: QBA60886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920039-2920729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920039-2920729 bp Feature: gene Location: 2921571-2921780 bp Feature: gene Location: 2921777-2922508 bp Ori: QBA60888.1 Feature: domain Description: Laminin_G_3 Location: 2922113-2922452 bp Feature: domain Description: Laminin_G_3 Location: 29221 1 3-2922452 bp Feature: gene Location: 3001237-3002502 bp Ori: QBA60982.1 Gene: dinB_3 Feature: domain Description: umuC Location: 3001240-3002500 bp Feature: domain Description: umuC Location: 3001 240-3002500 bp Feature: gene Location: 3002504-3003010 bp Ori: QBA60983.1 Feature: domain Description: PRK10276 Location: 3002594-3003005 bp Feature: domain Description: PRK1 0276 Location: 3002594-3003005 bp Feature: gene Location: 3003003-3004490 bp Ori: QBA60984.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3003408-3004098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3003408-3004098 bp Feature: gene Location: 3004913-3006400 bp Ori: QBA60985.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005318-3006008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300531 8-3006008 bp Feature: gene Location: 3008141-3008845 bp Ori: QBA60986.1 Feature: domain Description: Rve Location: 3008144-3008789 bp Feature: domain Description: Rve Location: 30081 44-3008789 bp Feature: gene Location: 3009306-3009593 bp Feature: gene Location: 3137634-3138899 bp Ori: QBA61111.1 Gene: dinB_2 Feature: domain Description: umuC Location: 3137637-3138897 bp Feature: domain Description: umuC Location: 31 37637-31 38897 bp Feature: gene Location: 3138902-3139321 bp Ori: QBA61112.1 Gene: lexA_2 Feature: domain Description: PRK10276 Location: 3138905-3139316 bp Feature: domain Description: PRK1 0276 Location: 31 38905-31 3931 6 bp Feature: gene Location: 3139400-3140887 bp Ori: QBA61113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3139805-3140495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 39805-31 40495 bp Feature: gene Location: 3141310-3142797 bp Ori: QBA61114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141715-3142405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 41 71 5-31 42405 bp Feature: gene Location: 3143220-3144707 bp Ori: QBA61115.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3143625-3144315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 43625-31 4431 5 bp Feature: gene Location: 3145322-3145564 bp Ori: QBA61116.1 Gene: dinI_3 Feature: domain Description: DinI Location: 3145373-3145553 bp Feature: domain Description: DinI Location: 31 45373-31 45553 bp Feature: gene Location: 3145735-3146871 bp Ori: QBA61117.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3145915-3146818 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 4591 5-31 4681 8 bp Feature: gene Location: 3478154-3478387 bp Ori: QBA61425.1 Gene: dinI_1 Feature: domain Description: DinI Location: 3478196-3478382 bp Feature: domain Description: DinI Location: 34781 96-3478382 bp Feature: gene Location: 3478398-3478694 bp Feature: gene Location: 3478687-3480174 bp Ori: QBA61427.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3479092-3479782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3479092-3479782 bp Feature: gene Location: 3480650-3483064 bp Ori: QBA61428.1 Feature: domain Description: Phage_GPA Location: 3481214-3482180 bp Feature: domain Description: Phage_GPA Location: 3481 21 4-34821 80 bp Feature: gene Location: 3483061-3483918 bp Ori: QBA61429.1 Gene: dam_1 Feature: domain Description: dam Location: 3483064-3483841 bp Feature: domain Description: dam Location: 3483064-3483841 bp Feature: gene Location: 3486755-3487699 bp Feature: gene Location: 3487665-3487805 bp Feature: gene Location: 3487798-3489285 bp Ori: QBA61439.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3488203-3488893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3488203-3488893 bp Feature: gene Location: 3489701-3490753 bp Ori: QBA61440.1 Feature: domain Description: int Location: 3489704-3490703 bp Feature: domain Description: int Location: 3489704-3490703 bp Feature: gene Location: 3490876-3491439 bp Ori: QBA61441.1 Gene: betI_2 Feature: domain Description: YbjK Location: 3490882-3491419 bp Feature: domain Description: YbjK Location: 3490882-3491 41 9 bp Feature: gene Location: 3929934-3930251 bp Ori: QBA61832.1 Feature: domain Description: PRK10276 Location: 3929940-3930054 bp Feature: domain Description: PRK1 0276 Location: 3929940-3930054 bp Feature: domain Description: PRK10276 Location: 3930081-3930150 bp Feature: domain Description: PRK1 0276 Location: 3930081 -39301 50 bp Feature: gene Location: 3930251-3930490 bp Feature: gene Location: 3930568-3932055 bp Ori: QBA61834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3930973-3931663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3930973-3931 663 bp Feature: gene Location: 3932505-3932714 bp Feature: gene Location: 3932711-3933442 bp Ori: QBA61836.1 Feature: domain Description: Laminin_G_3 Location: 3933032-3933386 bp Feature: domain Description: Laminin_G_3 Location: 3933032-3933386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10124 (putative UDP-glucose lipid carrier transferase; Provisional), GT4_MtfB-like (cd03809), RVT-GII, Acyl_transf_3 (pfam01757), GT4_WbaZ-like (cd03804), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10597 (DNA damage-inducible protein I; Provisional)
Laminin_G_3 (pfam13385), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Rve (COG3316), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_GPA (pfam05840), dam (TIGR00571), int (PHA02601), YbjK (COG3226)

Seq: CP035536.1 Klebsiella pneumoniae subsp. pneumoniae strain CCRI-21711 plasmid pKp711-1, complete sequence (185957 bp)
Overview 1 RT 1: 28777-33824 bp Neighborhood of RT #1 [28777, 33826] PRK10276 zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Antirestrict Feature: gene Location: 28777-29202 bp Ori: QBA57805.1 Feature: domain Description: PRK10276 Location: 28780-29188 bp Feature: domain Description: PRK102 76 Location: 2 8780-2 9188 bp Feature: gene Location: 29303-30523 bp Ori: QBA57806.1 Feature: domain Description: zf-ISL3 Location: 29435-29561 bp Feature: domain Description: zf-ISL3 Location: 2 9435-2 9561 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 29579-29726 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2 9579-2 972 6 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 29777-30482 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 9777-30482 bp Feature: gene Location: 30932-32416 bp Ori: QBA57807.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31334-32024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31334-32 02 4 bp Feature: gene Location: 32650-32880 bp Feature: gene Location: 33401-33826 bp Ori: QBA57809.1 Feature: domain Description: Antirestrict Location: 33536-33824 bp Feature: domain Description: Antirestrict Location: 33536-3382 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII, Antirestrict (pfam03230)

Seq: CP035538.1 Klebsiella pneumoniae subsp. pneumoniae strain CCRI-21711 plasmid pKp711-3, complete sequence (48698 bp)
Overview 1 RT 1: 262-3849 bp Neighborhood of RT #1 [262, 3857] RVT-GII PRK10276 umuC Feature: gene Location: 262-1749 bp Ori: QBA58071.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-13 57 bp Feature: gene Location: 2155-2586 bp Ori: QBA58072.1 Feature: domain Description: PRK10276 Location: 2206-2569 bp Feature: domain Description: PRK10276 Location: 2206-2569 bp Feature: gene Location: 2586-3857 bp Ori: QBA58073.1 Feature: domain Description: umuC Location: 2589-3849 bp Feature: domain Description: umuC Location: 2589-3 849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)