myRT

myRT report for GCA_004171185.1_ASM417118v1

Download annotations/find similar RTs

Seq: CP032513.1 Shigella flexneri strain SFL1520 chromosome, complete genome (4575536 bp)
Overview 1 RT 1: 2132316-2136172 bp Neighborhood of RT #1 [2132316, 2136180] InsE RVT-GII GIIM PHA02517 Inovirus_Gp2 Feature: gene Location: 2132316-2133055 bp Feature: domain Description: InsE Location: 2132319-2132658 bp Feature: domain Description: InsE Location: 21 3231 9-21 32658 bp Feature: gene Location: 2133048-2133419 bp Feature: gene Location: 2133713-2135236 bp Ori: QBB81092.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2133986-2134718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 33986-21 3471 8 bp Feature: domain Description: GIIM Note: maturase Location: 2134793-2134991 bp Feature: domain Description: GIIM Note: maturase Location: 21 34793-21 34991 bp Feature: gene Location: 2135326-2135799 bp Feature: domain Description: PHA02517 Location: 2135332-2135797 bp Feature: domain Description: PHA0251 7 Location: 21 35332-21 35797 bp Feature: gene Location: 2135839-2136180 bp Ori: QBB81093.1 Feature: domain Description: Inovirus_Gp2 Location: 2135908-2136172 bp Feature: domain Description: Inovirus_Gp2 Location: 21 35908-21 361 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Inovirus_Gp2 (pfam11726)