myRT

myRT report for GCA_004293625.1_ASM429362v1

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Seq: CP033040.1 Thiomicrorhabdus sp. 13-15A chromosome, complete genome (2829883 bp)
Overview 1 RT 1: 534420-540611 bp 2 RT 2: 1857645-1862337 bp Neighborhood of RT #1 [534420, 540611] groEL RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [1857645, 1862345] PTS-II-BC-sucr DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 534420-536054 bp Feature: domain Description: groEL Location: 534423-536049 bp Feature: domain Description: groEL Location: 534423-536049 bp Feature: gene Location: 536113-536250 bp Feature: gene Location: 537225-538916 bp Feature: domain Description: RVT_N Location: 537276-537510 bp Feature: domain Description: RVT_N Location: 537276-53751 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537564-538209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537564-538209 bp Feature: domain Description: GIIM Note: maturase Location: 538263-538494 bp Feature: domain Description: GIIM Note: maturase Location: 538263-538494 bp Feature: domain Description: HNHc Note: nucleases Location: 538710-538866 bp Feature: domain Description: HNHc Note: nucleases Location: 53871 0-538866 bp Feature: gene Location: 539152-539289 bp Feature: gene Location: 539511-540611 bp Feature: gene Location: 1857645-1858601 bp Feature: domain Description: PTS-II-BC-sucr Location: 1857708-1857906 bp Feature: domain Description: PTS-II-BC-sucr Location: 1 857708-1 857906 bp Feature: gene Location: 1858773-1859609 bp Feature: gene Location: 1859621-1860952 bp Feature: domain Description: DUF1566 Location: 1859675-1859849 bp Feature: domain Description: DUF1 566 Location: 1 859675-1 859849 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1860098-1860866 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 860098-1 860866 bp Feature: gene Location: 1861066-1861440 bp Feature: domain Description: Avd_like Location: 1861093-1861405 bp Feature: domain Description: Avd_like Location: 1 861 093-1 861 405 bp Feature: gene Location: 1861503-1862345 bp Feature: domain Description: DUF1566 Location: 1862133-1862337 bp Feature: domain Description: DUF1 566 Location: 1 8621 33-1 862337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PTS-II-BC-sucr (TIGR01996), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)