myRT

myRT report for GCA_004295385.1_ASM429538v1

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Seq: CP036188.1 Klebsiella pneumoniae strain BA1559 plasmid pIncFIBK, complete sequence (251327 bp)
Overview 1 RT 1: 90064-92843 bp Neighborhood of RT #1 [90064, 92843] PRK10276 RVT-GII Feature: gene Location: 90064-90489 bp Ori: QBF99470.1 Gene: umuD Feature: domain Description: PRK10276 Location: 90067-90475 bp Feature: domain Description: PRK1 0276 Location: 90067-90475 bp Feature: gene Location: 90643-90894 bp Feature: gene Location: 90894-92378 bp Ori: QBF99472.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91296-91986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 296-91 986 bp Feature: gene Location: 92371-92445 bp Feature: gene Location: 92613-92843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP036187.1 Klebsiella pneumoniae strain BA1559 chromosome, complete genome (5402442 bp)
Overview 1 RT 1: 1412083-1419376 bp 2 RT 2: 3670943-3673921 bp 3 RT 3: 3841601-3844428 bp 4 RT 4: 4640978-4644208 bp Neighborhood of RT #1 [1412083, 1419426] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [3670943, 3673921] PRK10276 RVT-GII Neighborhood of RT #3 [3841601, 3844439] PRK10276 RVT-GII group_II_RT_mat DinI Neighborhood of RT #4 [4640978, 4644208] PRK10276 RVT-GII Feature: gene Location: 1412083-1412793 bp Ori: QBF95604.1 Feature: domain Description: FimC Location: 1412137-1412776 bp Feature: domain Description: FimC Location: 1412 137-1412 776 bp Feature: gene Location: 1412840-1415434 bp Ori: QBF95605.1 Feature: domain Description: FimD Location: 1412882-1415423 bp Feature: domain Description: FimD Location: 1412 882 -141542 3 bp Feature: gene Location: 1415431-1417511 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1415842-1416286 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1415842 -14162 86 bp Feature: gene Location: 1417553-1418008 bp Ori: QBF95606.1 Feature: domain Description: Integrase_1 Location: 1417556-1417790 bp Feature: domain Description: Integrase_1 Location: 1417556-1417790 bp Feature: gene Location: 1418188-1419426 bp Feature: domain Description: PRK09692 Location: 1418194-1419376 bp Feature: domain Description: PRK09692 Location: 1418194-1419376 bp Feature: gene Location: 3670943-3671362 bp Ori: QBF97598.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3670946-3671357 bp Feature: domain Description: PRK102 76 Location: 3670946-3671357 bp Feature: gene Location: 3671340-3671525 bp Feature: gene Location: 3671441-3672923 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3671843-3672443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3671843-3672 443 bp Feature: gene Location: 3673057-3673320 bp Feature: gene Location: 3673832-3673921 bp Feature: gene Location: 3841601-3842020 bp Ori: QBF97767.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3841604-3842015 bp Feature: domain Description: PRK102 76 Location: 3841604-3842 015 bp Feature: gene Location: 3841998-3842183 bp Feature: gene Location: 3842099-3843580 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3842501-3842672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3842 501-3842 672 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3843164-3843446 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3843164-3843446 bp Feature: gene Location: 3843580-3843831 bp Feature: gene Location: 3844197-3844439 bp Ori: QBF97770.1 Feature: domain Description: DinI Location: 3844248-3844428 bp Feature: domain Description: DinI Location: 38442 48-384442 8 bp Feature: gene Location: 4640978-4641295 bp Ori: QBF98468.1 Feature: domain Description: PRK10276 Location: 4640984-4641098 bp Feature: domain Description: PRK102 76 Location: 4640984-4641098 bp Feature: gene Location: 4641295-4641534 bp Feature: gene Location: 4641612-4643096 bp Ori: QBF98470.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642014-4642704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642 014-4642 704 bp Feature: gene Location: 4643229-4643468 bp Feature: gene Location: 4643588-4644208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, group_II_RT_mat (TIGR04416), DinI (pfam06183)