myRT

myRT report for GCA_004295405.1_ASM429540v1

Download annotations/find similar RTs

Seq: CP036190.1 Klebsiella pneumoniae strain BA34918 chromosome, complete genome (5439838 bp)
Overview 1 RT 1: 2060312-2064524 bp 2 RT 2: 4020414-4025209 bp 3 RT 3: 5396484-5403300 bp Neighborhood of RT #1 [2060312, 2064526] UlaG AcrR RVT-GII GIIM PRK10250 Neighborhood of RT #2 [4020414, 4025211] DUF1471 DUF1471 RVT-GII GIIM PRK05066 PRK05086 Neighborhood of RT #3 [5396484, 5403300] HTH_1 PBP2_CrgA_like_3 YjgH_like RVT-Retrons Feature: gene Location: 2060312-2061412 bp Ori: QBG01472.1 Feature: domain Description: UlaG Location: 2060618-2061368 bp Feature: domain Description: UlaG Location: 206061 8-2061 368 bp Feature: gene Location: 2061607-2061918 bp Feature: domain Description: AcrR Location: 2061616-2061829 bp Feature: domain Description: AcrR Location: 2061 61 6-2061 829 bp Feature: gene Location: 2061983-2063236 bp Ori: QBG04545.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2062175-2062799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20621 75-2062799 bp Feature: domain Description: GIIM Note: maturase Location: 2062838-2063057 bp Feature: domain Description: GIIM Note: maturase Location: 2062838-2063057 bp Feature: gene Location: 2063883-2064158 bp Feature: gene Location: 2064158-2064526 bp Ori: QBG01473.1 Feature: domain Description: PRK10250 Location: 2064161-2064524 bp Feature: domain Description: PRK1 0250 Location: 20641 61 -2064524 bp Feature: gene Location: 4020414-4020680 bp Ori: QBG03179.1 Gene: yhcN Feature: domain Description: DUF1471 Location: 4020519-4020678 bp Feature: domain Description: DUF1 471 Location: 402051 9-4020678 bp Feature: gene Location: 4020779-4021042 bp Ori: QBG03180.1 Gene: yhcN Feature: domain Description: DUF1471 Location: 4020884-4021040 bp Feature: domain Description: DUF1 471 Location: 4020884-4021 040 bp Feature: gene Location: 4021717-4022970 bp Ori: QBG04624.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4021909-4022533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4021 909-4022533 bp Feature: domain Description: GIIM Note: maturase Location: 4022572-4022791 bp Feature: domain Description: GIIM Note: maturase Location: 4022572-4022791 bp Feature: gene Location: 4023388-4023858 bp Ori: QBG03181.1 Gene: argR Feature: domain Description: PRK05066 Location: 4023391-4023853 bp Feature: domain Description: PRK05066 Location: 4023391 -4023853 bp Feature: gene Location: 4024273-4025211 bp Ori: QBG03182.1 Feature: domain Description: PRK05086 Location: 4024276-4025209 bp Feature: domain Description: PRK05086 Location: 4024276-4025209 bp Feature: gene Location: 5396484-5397404 bp Ori: QBG04398.1 Feature: domain Description: HTH_1 Location: 5396499-5396670 bp Feature: domain Description: HTH_1 Location: 5396499-5396670 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 5396760-5397366 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 5396760-5397366 bp Feature: gene Location: 5397545-5397934 bp Ori: QBG04399.1 Feature: domain Description: YjgH_like Location: 5397605-5397926 bp Feature: domain Description: YjgH_like Location: 5397605-5397926 bp Feature: gene Location: 5398701-5399800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5398884-5399412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5398884-539941 2 bp Feature: gene Location: 5399915-5402159 bp Feature: gene Location: 5403070-5403300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UlaG (COG2220), AcrR (COG1309), RVT-GII, GIIM (pfam08388), PRK10250 (MmcQ/YjbR family DNA-binding protein), DUF1471 (pfam07338), PRK05066 (transcriptional regulator ArgR), PRK05086 (malate dehydrogenase; Provisional), HTH_1 (pfam00126), PBP2_CrgA_like_3 (cd08472)
YjgH_like (cd02198), RVT-Retrons

Seq: CP036193.1 Klebsiella pneumoniae strain BA34918 plasmid pIncFIBpQil, complete sequence (164195 bp)
Overview 1 RT 1: 9425-14061 bp Neighborhood of RT #1 [9425, 14061] PRK15417 Arr-ms RVT-GII N6_acetyl_AAC6 Feature: gene Location: 9425-10438 bp Ori: QBG05043.1 Gene: intI1 Feature: domain Description: PRK15417 Location: 9428-10436 bp Feature: domain Description: PRK15417 Location: 942 8-10436 bp Feature: gene Location: 10611-11063 bp Ori: QBG05044.1 Feature: domain Description: Arr-ms Location: 10671-10977 bp Feature: domain Description: Arr-ms Location: 10671-10977 bp Feature: gene Location: 11144-12399 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11336-11957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11336-11957 bp Feature: gene Location: 13120-13674 bp Ori: QBG05045.1 Gene: aac(6')-Ib Feature: domain Description: N6_acetyl_AAC6 Location: 13126-13672 bp Feature: domain Description: N6_acetyl_AAC6 Location: 1312 6-13672 bp Feature: gene Location: 13903-14061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, N6_acetyl_AAC6 (TIGR04431)