myRT

myRT report for GCA_004295605.1_ASM429560v1

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Seq: CP035929.1 Klebsiella pneumoniae strain B31 chromosome, complete genome (5273146 bp)
Overview 1 RT 1: 704569-723226 bp 2 RT 2: 826122-833224 bp Neighborhood of RT #1 [704569, 723228] PHA02517 RVT-GII GIIM PHA02517 DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [826122, 833226] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 704569-705048 bp Ori: QBF19264.1 Feature: domain Description: PHA02517 Location: 704629-704983 bp Feature: domain Description: PHA0251 7 Location: 704629-704983 bp Feature: gene Location: 705261-705686 bp Feature: gene Location: 705655-707163 bp Ori: QBF19266.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705913-706645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70591 3-706645 bp Feature: domain Description: GIIM Note: maturase Location: 706720-706918 bp Feature: domain Description: GIIM Note: maturase Location: 706720-70691 8 bp Feature: gene Location: 707286-707702 bp Ori: QBF19267.1 Feature: domain Description: PHA02517 Location: 707289-707694 bp Feature: domain Description: PHA0251 7 Location: 707289-707694 bp Feature: gene Location: 707923-713658 bp Ori: QBF19268.1 Gene: uvrD1 Feature: domain Description: DUF4011 Location: 708013-708847 bp Feature: domain Description: DUF401 1 Location: 70801 3-708847 bp Feature: domain Description: DEXXQc_SF1 Location: 709204-712306 bp Feature: domain Description: DEXXQc_SF1 Location: 709204-71 2306 bp Feature: domain Description: SF1_C_Upf1 Location: 712315-712843 bp Feature: domain Description: SF1 _C_Upf1 Location: 71 231 5-71 2843 bp Feature: domain Description: MTES_1575 Location: 712972-713263 bp Feature: domain Description: MTES_1 575 Location: 71 2972-71 3263 bp Feature: gene Location: 713864-719599 bp Ori: QBF19270.1 Gene: uvrD2 Feature: domain Description: DUF4011 Location: 713954-714788 bp Feature: domain Description: DUF401 1 Location: 71 3954-71 4788 bp Feature: domain Description: DEXXQc_SF1 Location: 715145-718247 bp Feature: domain Description: DEXXQc_SF1 Location: 71 51 45-71 8247 bp Feature: domain Description: SF1_C_Upf1 Location: 718256-718784 bp Feature: domain Description: SF1 _C_Upf1 Location: 71 8256-71 8784 bp Feature: domain Description: MTES_1575 Location: 718913-719204 bp Feature: domain Description: MTES_1 575 Location: 71 891 3-71 9204 bp Feature: gene Location: 719820-720236 bp Ori: QBF19271.1 Feature: domain Description: PHA02517 Location: 719823-720228 bp Feature: domain Description: PHA0251 7 Location: 71 9823-720228 bp Feature: gene Location: 720359-721882 bp Ori: QBF19272.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720632-721364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720632-721 364 bp Feature: domain Description: GIIM Note: maturase Location: 721439-721637 bp Feature: domain Description: GIIM Note: maturase Location: 721 439-721 637 bp Feature: gene Location: 722474-722953 bp Ori: QBF19273.1 Feature: domain Description: PHA02517 Location: 722534-722888 bp Feature: domain Description: PHA0251 7 Location: 722534-722888 bp Feature: gene Location: 722953-723228 bp Ori: QBF19274.1 Feature: domain Description: InsE Location: 722995-723226 bp Feature: domain Description: InsE Location: 722995-723226 bp Feature: gene Location: 826122-826886 bp Ori: QBF19379.1 Feature: domain Description: FimC Location: 826167-826869 bp Feature: domain Description: FimC Location: 8261 67-826869 bp Feature: gene Location: 826933-829527 bp Ori: QBF19380.1 Feature: domain Description: FimD Location: 826975-829516 bp Feature: domain Description: FimD Location: 826975-82951 6 bp Feature: gene Location: 829524-831605 bp Ori: QBF19381.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 829935-830379 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 829935-830379 bp Feature: gene Location: 831695-832102 bp Ori: QBF19382.1 Feature: domain Description: Integrase_1 Location: 831698-831884 bp Feature: domain Description: Integrase_1 Location: 831 698-831 884 bp Feature: gene Location: 832363-833226 bp Ori: QBF19383.1 Feature: domain Description: PRK09692 Location: 832387-833224 bp Feature: domain Description: PRK09692 Location: 832387-833224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), InsE (COG2963), FimC (COG3121), FimD (COG3188)
RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)