myRT

myRT report for GCA_004295665.1_ASM429566v1

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Seq: CP034759.1 Litorilituus sediminis strain JCM 17549 chromosome, complete genome (4275717 bp)
Overview 1 RT 1: 670472-681392 bp Neighborhood of RT #1 [670472, 681415] NERD STKc_PknB_like STKc_PknB_like KOG1802 KOG1802 RVT-UG15 RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like HsdM Feature: gene Location: 670472-671866 bp Feature: gene Location: 671872-676818 bp Ori: QBG34794.1 Feature: domain Description: NERD Location: 672010-672331 bp Feature: domain Description: NERD Location: 67201 0-672331 bp Feature: domain Description: STKc_PknB_like Location: 672856-673042 bp Feature: domain Description: STKc_PknB_like Location: 672856-673042 bp Feature: domain Description: STKc_PknB_like Location: 673540-673819 bp Feature: domain Description: STKc_PknB_like Location: 673540-67381 9 bp Feature: domain Description: KOG1802 Location: 675010-675298 bp Feature: domain Description: KOG1 802 Location: 67501 0-675298 bp Feature: domain Description: KOG1802 Location: 675742-676756 bp Feature: domain Description: KOG1 802 Location: 675742-676756 bp Feature: gene Location: 676859-678508 bp Ori: QBG34795.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 677285-677693 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 677285-677693 bp Feature: gene Location: 678505-679854 bp Ori: QBG34796.1 Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 678718-679066 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 67871 8-679066 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 679342-679789 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 679342-679789 bp Feature: gene Location: 679844-681415 bp Ori: QBG34797.1 Feature: domain Description: HsdM Location: 679877-681392 bp Feature: domain Description: HsdM Location: 679877-681 392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), STKc_PknB_like (cd14014), KOG1802 (KOG1802, RNA helicase nonsense mRNA reducing factor (pNORF1) ), RVT-UG15, RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266), HsdM (COG0286)