myRT

myRT report for GCA_004296455.1_ASM429645v1

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Seq: AP018278.1 Calothrix sp. NIES-4101 plasmid plasmid5 DNA, complete genome (72581 bp)
Overview 1 RT 1: 13050-18418 bp Neighborhood of RT #1 [13050, 18441] SDR_c RVT-GII GIIM DDE_Tnp_1 PIN_MtVapC26-like Feature: gene Location: 13050-13430 bp Feature: gene Location: 13423-14160 bp Ori: BAZ36847.1 Feature: domain Description: SDR_c Location: 13441-14143 bp Feature: domain Description: SDR_c Location: 1 3441 -1 41 43 bp Feature: gene Location: 14799-16016 bp Ori: BAZ36848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14964-15585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4964-1 5585 bp Feature: domain Description: GIIM Note: maturase Location: 15633-15864 bp Feature: domain Description: GIIM Note: maturase Location: 1 5633-1 5864 bp Feature: gene Location: 16109-17545 bp Ori: BAZ36849.1 Feature: domain Description: DDE_Tnp_1 Location: 16640-17147 bp Feature: domain Description: DDE_Tnp_1 Location: 1 6640-1 71 47 bp Feature: gene Location: 18031-18441 bp Ori: BAZ36850.1 Feature: domain Description: PIN_MtVapC26-like Location: 18043-18418 bp Feature: domain Description: PIN_MtVapC26-like Location: 1 8043-1 841 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_c (cd05233), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), PIN_MtVapC26-like (cd18696)

Seq: AP018277.1 Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome (126615 bp)
Overview 1 RT 1: 16639-25424 bp Neighborhood of RT #1 [16639, 25441] ParM_like RVT-GII GIIM McrA RVT_N RVT-GII GIIM HNH RVT_N RVT-GII Spo0J Spo0J BcsQ Feature: gene Location: 16639-17136 bp Ori: BAZ36732.1 Feature: domain Description: ParM_like Location: 16711-17005 bp Feature: domain Description: ParM_like Location: 16711-17005 bp Feature: gene Location: 17228-17656 bp Feature: gene Location: 17913-19259 bp Ori: BAZ36734.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17955-18504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17955-18504 bp Feature: domain Description: GIIM Note: maturase Location: 18606-18837 bp Feature: domain Description: GIIM Note: maturase Location: 18606-18837 bp Feature: domain Description: McrA Location: 18879-19194 bp Feature: domain Description: McrA Location: 18879-19194 bp Feature: gene Location: 19312-21147 bp Ori: BAZ36735.1 Feature: domain Description: RVT_N Location: 19372-19618 bp Feature: domain Description: RVT_N Location: 19372 -19618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19660-20344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19660-2 0344 bp Feature: domain Description: GIIM Note: maturase Location: 20443-20677 bp Feature: domain Description: GIIM Note: maturase Location: 2 0443-2 0677 bp Feature: domain Description: HNH Note: nucleases Location: 20902-21037 bp Feature: domain Description: HNH Note: nucleases Location: 2 0902 -2 1037 bp Feature: gene Location: 21719-22210 bp Ori: BAZ36736.1 Feature: domain Description: RVT_N Location: 21761-22007 bp Feature: domain Description: RVT_N Location: 2 1761-2 2 007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22049-22193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 049-2 2 193 bp Feature: gene Location: 23551-24603 bp Ori: BAZ36737.1 Feature: domain Description: Spo0J Location: 23650-24028 bp Feature: domain Description: Spo0J Location: 2 3650-2 402 8 bp Feature: domain Description: Spo0J Location: 24253-24538 bp Feature: domain Description: Spo0J Location: 2 42 53-2 4538 bp Feature: gene Location: 24668-25441 bp Ori: BAZ36738.1 Feature: domain Description: BcsQ Location: 24683-25424 bp Feature: domain Description: BcsQ Location: 2 4683-2 542 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParM_like (cd10227), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), HNH (pfam01844), Spo0J (COG1475), BcsQ (COG1192)

Seq: AP018280.1 Calothrix sp. NIES-4101 DNA, complete genome (7235916 bp)
Overview 1 RT 1: 76-7188 bp 2 RT 2: 15974-26385 bp 3 RT 3: 1344005-1349407 bp 4 RT 4: 4636989-4646418 bp Neighborhood of RT #1 [76, 7241] RVT-GII McrA RVT-GII Intron_maturas2 HNHc RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNH RVT_N RVT_N Neighborhood of RT #2 [15974, 26495] RVT_N RVT_N RVT_N RVT-GII GIIM HNH RVT-GII GIIM HNHc RVT-GII Intron_maturas2 HNHc RVT-GII McrA InsQ Neighborhood of RT #3 [1344005, 1349418] sigma70-ECF RVT_N RVT-GII GIIM HNH PRK07399 Neighborhood of RT #4 [4636989, 4646418] FhaB FhaB RVT_N RVT-GII GIIM HNH FhaB Feature: gene Location: 76-408 bp Feature: gene Location: 265-945 bp Ori: BAZ36912.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-3 85 bp Feature: domain Description: McrA Location: 607-925 bp Feature: domain Description: McrA Location: 607-925 bp Feature: gene Location: 1098-2006 bp Ori: BAZ36913.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1278 bp Feature: domain Description: Intron_maturas2 Location: 1404-1617 bp Feature: domain Description: Intron_maturas2 Location: 1404-1617 bp Feature: domain Description: HNHc Note: nucleases Location: 1803-1971 bp Feature: domain Description: HNHc Note: nucleases Location: 1803 -1971 bp Feature: gene Location: 2153-3406 bp Ori: BAZ36914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2195-2723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2195-2723 bp Feature: domain Description: GIIM Note: maturase Location: 2786-3008 bp Feature: domain Description: GIIM Note: maturase Location: 2786-3 008 bp Feature: domain Description: HNHc Note: nucleases Location: 3236-3395 bp Feature: domain Description: HNHc Note: nucleases Location: 3 23 6-3 3 95 bp Feature: gene Location: 3459-5294 bp Ori: BAZ36915.1 Feature: domain Description: RVT_N Location: 3519-3765 bp Feature: domain Description: RVT_N Location: 3 519-3 765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807-4491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 807-4491 bp Feature: domain Description: GIIM Note: maturase Location: 4590-4824 bp Feature: domain Description: GIIM Note: maturase Location: 4590-4824 bp Feature: domain Description: HNH Note: nucleases Location: 5049-5184 bp Feature: domain Description: HNH Note: nucleases Location: 5049-5184 bp Feature: gene Location: 5991-6368 bp Ori: BAZ36916.1 Feature: domain Description: RVT_N Location: 6045-6288 bp Feature: domain Description: RVT_N Location: 6045-6288 bp Feature: gene Location: 6918-7241 bp Ori: BAZ36917.1 Feature: domain Description: RVT_N Location: 6954-7188 bp Feature: domain Description: RVT_N Location: 6954-7188 bp Feature: gene Location: 15974-16297 bp Ori: BAZ36927.1 Feature: domain Description: RVT_N Location: 16010-16244 bp Feature: domain Description: RVT_N Location: 16010-16244 bp Feature: gene Location: 16847-17224 bp Ori: BAZ36928.1 Feature: domain Description: RVT_N Location: 16901-17144 bp Feature: domain Description: RVT_N Location: 16901-17144 bp Feature: gene Location: 17921-19756 bp Ori: BAZ36929.1 Feature: domain Description: RVT_N Location: 17981-18227 bp Feature: domain Description: RVT_N Location: 17981-18227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18269-18953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18269-18953 bp Feature: domain Description: GIIM Note: maturase Location: 19052-19286 bp Feature: domain Description: GIIM Note: maturase Location: 19052-19286 bp Feature: domain Description: HNH Note: nucleases Location: 19511-19646 bp Feature: domain Description: HNH Note: nucleases Location: 19511-19646 bp Feature: gene Location: 19809-21062 bp Ori: BAZ36930.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19851-20379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19851-203 79 bp Feature: domain Description: GIIM Note: maturase Location: 20442-20664 bp Feature: domain Description: GIIM Note: maturase Location: 20442-20664 bp Feature: domain Description: HNHc Note: nucleases Location: 20892-21051 bp Feature: domain Description: HNHc Note: nucleases Location: 20892-21051 bp Feature: gene Location: 21209-22117 bp Ori: BAZ36931.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21266-21389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21266-213 89 bp Feature: domain Description: Intron_maturas2 Location: 21515-21728 bp Feature: domain Description: Intron_maturas2 Location: 21515-21728 bp Feature: domain Description: HNHc Note: nucleases Location: 21914-22082 bp Feature: domain Description: HNHc Note: nucleases Location: 21914-22082 bp Feature: gene Location: 22270-22950 bp Ori: BAZ36932.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22276-22390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22276-223 90 bp Feature: domain Description: McrA Location: 22612-22930 bp Feature: domain Description: McrA Location: 22612-2293 0 bp Feature: gene Location: 22807-23139 bp Feature: gene Location: 24576-26495 bp Ori: BAZ36934.1 Feature: domain Description: InsQ Location: 25869-26385 bp Feature: domain Description: InsQ Location: 25869-263 85 bp Feature: gene Location: 1344005-1345171 bp Ori: BAZ38081.1 Feature: domain Description: sigma70-ECF Location: 1344221-1345064 bp Feature: domain Description: sigma70-ECF Location: 13 44221-13 45064 bp Feature: gene Location: 1345397-1345963 bp Feature: gene Location: 1345916-1347751 bp Ori: BAZ38083.1 Feature: domain Description: RVT_N Location: 1345976-1346222 bp Feature: domain Description: RVT_N Location: 13 45976-13 46222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1346264-1346948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 46264-13 46948 bp Feature: domain Description: GIIM Note: maturase Location: 1347047-1347281 bp Feature: domain Description: GIIM Note: maturase Location: 13 47047-13 47281 bp Feature: domain Description: HNH Note: nucleases Location: 1347506-1347641 bp Feature: domain Description: HNH Note: nucleases Location: 13 47506-13 47641 bp Feature: gene Location: 1348132-1348464 bp Feature: gene Location: 1348483-1349418 bp Ori: BAZ38085.1 Feature: domain Description: PRK07399 Location: 1348495-1349407 bp Feature: domain Description: PRK073 99 Location: 13 48495-13 49407 bp Feature: gene Location: 4636989-4639367 bp Ori: BAZ40856.1 Feature: domain Description: FhaB Location: 4636992-4639362 bp Feature: domain Description: FhaB Location: 463 6992-463 93 62 bp Feature: gene Location: 4639433-4641931 bp Ori: BAZ40857.1 Feature: domain Description: FhaB Location: 4639487-4640816 bp Feature: domain Description: FhaB Location: 463 9487-4640816 bp Feature: gene Location: 4642569-4644404 bp Ori: BAZ40858.1 Feature: domain Description: RVT_N Location: 4642629-4642875 bp Feature: domain Description: RVT_N Location: 4642629-4642875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642917-4643601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642917-4643 601 bp Feature: domain Description: GIIM Note: maturase Location: 4643700-4643934 bp Feature: domain Description: GIIM Note: maturase Location: 4643 700-4643 93 4 bp Feature: domain Description: HNH Note: nucleases Location: 4644159-4644294 bp Feature: domain Description: HNH Note: nucleases Location: 4644159-4644294 bp Feature: gene Location: 4644516-4646087 bp Ori: BAZ40859.1 Feature: domain Description: FhaB Location: 4644579-4646061 bp Feature: domain Description: FhaB Location: 4644579-4646061 bp Feature: gene Location: 4646167-4646418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058), Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), RVT_N (pfam13655), HNH (pfam01844), InsQ (COG0675), sigma70-ECF (TIGR02937), PRK07399 (DNA polymerase III subunit delta'; Validated)
FhaB (COG3210)