myRT

myRT report for GCA_004319525.1_ASM431952v1

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Seq: CP036337.1 Klebsiella pneumoniae strain BP327 plasmid pIncFIBK, complete sequence (225575 bp)
Overview 1 RT 1: 110853-113935 bp Neighborhood of RT #1 [110853, 113949] DUF1472 RVT-GII group_II_RT_mat PRK10276 Feature: gene Location: 110853-110945 bp Feature: domain Description: DUF1472 Location: 110865-110931 bp Feature: domain Description: DUF1 472 Location: 1 1 0865-1 1 0931 bp Feature: gene Location: 111169-111399 bp Feature: gene Location: 111635-113119 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112037-112214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2037-1 1 221 4 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 112703-112985 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 1 2703-1 1 2985 bp Feature: gene Location: 113119-113370 bp Feature: gene Location: 113524-113949 bp Ori: QBH11343.1 Gene: umuD Feature: domain Description: PRK10276 Location: 113527-113935 bp Feature: domain Description: PRK1 0276 Location: 1 1 3527-1 1 3935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, group_II_RT_mat (TIGR04416), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP036335.1 Klebsiella pneumoniae strain BP327 chromosome, complete genome (5403681 bp)
Overview 1 RT 1: 1664586-1667566 bp 2 RT 2: 2632713-2635943 bp 3 RT 3: 4807054-4814401 bp Neighborhood of RT #1 [1664586, 1667566] PRK10276 RVT-GII Neighborhood of RT #2 [2632713, 2635943] PRK10276 RVT-GII Neighborhood of RT #3 [4807054, 4814451] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 1664586-1665005 bp Ori: QBH07399.1 Gene: umuD Feature: domain Description: PRK10276 Location: 1664589-1665000 bp Feature: domain Description: PRK102 76 Location: 1664589-1665000 bp Feature: gene Location: 1664983-1665168 bp Feature: gene Location: 1665084-1666569 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1665486-1665663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1665486-1665663 bp Feature: gene Location: 1666702-1666965 bp Feature: gene Location: 1667477-1667566 bp Feature: gene Location: 2632713-2633030 bp Ori: QBH08270.1 Feature: domain Description: PRK10276 Location: 2632719-2632833 bp Feature: domain Description: PRK102 76 Location: 2 632 719-2 632 833 bp Feature: gene Location: 2633030-2633269 bp Feature: gene Location: 2633347-2634831 bp Ori: QBH08272.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2633749-2634439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 633749-2 634439 bp Feature: gene Location: 2634964-2635203 bp Feature: gene Location: 2635323-2635943 bp Feature: gene Location: 4807054-4807818 bp Ori: QBH10203.1 Feature: domain Description: FimC Location: 4807099-4807801 bp Feature: domain Description: FimC Location: 4807099-4807801 bp Feature: gene Location: 4807865-4810459 bp Ori: QBH10204.1 Feature: domain Description: FimD Location: 4807907-4810448 bp Feature: domain Description: FimD Location: 4807907-4810448 bp Feature: gene Location: 4810456-4812536 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4810867-4811311 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4810867-4811311 bp Feature: gene Location: 4812578-4813033 bp Ori: QBH10205.1 Feature: domain Description: Integrase_1 Location: 4812581-4812815 bp Feature: domain Description: Integrase_1 Location: 4812 581-4812 815 bp Feature: gene Location: 4813213-4814451 bp Feature: domain Description: PRK09692 Location: 4813219-4814401 bp Feature: domain Description: PRK09692 Location: 48132 19-4814401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: CP036336.1 Klebsiella pneumoniae strain BP327 plasmid pIncHIB, complete sequence (242563 bp)
Overview 1 RT 1: 26392-30251 bp 2 RT 2: 238899-242182 bp Neighborhood of RT #1 [26392, 30251] HHA RVT-GII INT_Cre_C Neighborhood of RT #2 [238899, 242573] PRK10276 RVT-GII Rve Feature: gene Location: 26392-26646 bp Ori: QBH11022.1 Feature: domain Description: HHA Location: 26443-26626 bp Feature: domain Description: HHA Location: 26443 -26626 bp Feature: gene Location: 26911-27162 bp Feature: gene Location: 27162-28646 bp Ori: QBH11024.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27564-28254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27564-28254 bp Feature: gene Location: 28732-29868 bp Ori: QBH11025.1 Feature: domain Description: INT_Cre_C Location: 29155-29809 bp Feature: domain Description: INT_Cre_C Location: 29155-29809 bp Feature: gene Location: 29934-30251 bp Feature: gene Location: 238899-239321 bp Ori: QBH11211.1 Gene: umuD Feature: domain Description: PRK10276 Location: 238905-239307 bp Feature: domain Description: PRK10276 Location: 23 8905-23 93 07 bp Feature: gene Location: 239482-239733 bp Feature: gene Location: 239733-241217 bp Ori: QBH11213.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240135-240825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24013 5-240825 bp Feature: gene Location: 241870-242573 bp Feature: domain Description: Rve Location: 241873-242182 bp Feature: domain Description: Rve Location: 241873 -242182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Rve (COG3316)