myRT

myRT report for GCA_004322775.1_ASM432277v1

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Seq: CP036403.1 Serinicoccus sp. HY006 chromosome, complete genome (4169359 bp)
Overview 1 RT 1: 1228816-1235185 bp Neighborhood of RT #1 [1228816, 1235490] HTH_29 HTH_50 DDE_3 COG5421 RVT_N RVT-GII GIIM DDE_Tnp_1 COG3547 Feature: gene Location: 1228816-1229889 bp Feature: domain Description: HTH_29 Location: 1228921-1229080 bp Feature: domain Description: HTH_29 Location: 1 228921 -1 229080 bp Feature: domain Description: HTH_50 Location: 1229143-1229227 bp Feature: domain Description: HTH_50 Location: 1 2291 43-1 229227 bp Feature: domain Description: DDE_3 Location: 1229332-1229764 bp Feature: domain Description: DDE_3 Location: 1 229332-1 229764 bp Feature: gene Location: 1230261-1230671 bp Feature: domain Description: COG5421 Location: 1230459-1230630 bp Feature: domain Description: COG5421 Location: 1 230459-1 230630 bp Feature: gene Location: 1231280-1232830 bp Feature: domain Description: RVT_N Location: 1231361-1231598 bp Feature: domain Description: RVT_N Location: 1 231 361 -1 231 598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1231658-1232315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 231 658-1 23231 5 bp Feature: domain Description: GIIM Note: maturase Location: 1232372-1232606 bp Feature: domain Description: GIIM Note: maturase Location: 1 232372-1 232606 bp Feature: gene Location: 1232926-1233741 bp Feature: domain Description: DDE_Tnp_1 Location: 1232956-1233556 bp Feature: domain Description: DDE_Tnp_1 Location: 1 232956-1 233556 bp Feature: gene Location: 1234180-1235490 bp Feature: domain Description: COG3547 Location: 1234195-1235185 bp Feature: domain Description: COG3547 Location: 1 2341 95-1 2351 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_50 (pfam18024), DDE_3 (pfam13358), COG5421 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), COG3547 (Transposase )