myRT

myRT report for GCA_004322795.1_ASM432279v1

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Seq: CP036367.1 Klebsiella pneumoniae strain WCHKP115068 plasmid pKPC12_115068, complete sequence (55373 bp)
Overview 1 RT 1: 5776-9978 bp Neighborhood of RT #1 [5776, 9995] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 5776-6447 bp Ori: QBI10720.1 Feature: domain Description: Plasmid_stab_B Location: 5791-5998 bp Feature: domain Description: Plasmid_stab_B Location: 5791 -5998 bp Feature: domain Description: Plasmid_stab_B Location: 6103-6310 bp Feature: domain Description: Plasmid_stab_B Location: 61 03-631 0 bp Feature: gene Location: 6450-7421 bp Ori: QBI10721.1 Feature: domain Description: StbA Location: 6453-7398 bp Feature: domain Description: StbA Location: 6453-7398 bp Feature: gene Location: 7670-9154 bp Ori: QBI10760.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8072-8762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8072-8762 bp Feature: gene Location: 9154-9405 bp Feature: gene Location: 9564-9995 bp Ori: QBI10723.1 Gene: umuD Feature: domain Description: PRK10276 Location: 9615-9978 bp Feature: domain Description: PRK1 0276 Location: 961 5-9978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP036365.1 Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome (5451414 bp)
Overview 1 RT 1: 2604887-2609749 bp 2 RT 2: 2930226-2934526 bp 3 RT 3: 3003248-3007356 bp 4 RT 4: 3155612-3159748 bp 5 RT 5: 4398059-4403791 bp 6 RT 6: 4420825-4425706 bp 7 RT 7: 4884503-4887184 bp 8 RT 8: 5046341-5050467 bp Neighborhood of RT #1 [2604887, 2609775] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [2930226, 2934526] PRK05318 RVT-GII PRK10597 Neighborhood of RT #3 [3003248, 3007358] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3155612, 3159750] RVT-GII PRK10276 umuC Neighborhood of RT #5 [4398059, 4404321] AAA_15 RVT-Retrons STKc_PknB_like Neighborhood of RT #6 [4420825, 4425711] YccC PRK10016 RVT-GII dacD Neighborhood of RT #7 [4884503, 4887189] RVT-GII DinI Neighborhood of RT #8 [5046341, 5051321] RVT-GII Phage_GPA Feature: gene Location: 2604887-2605939 bp Ori: QBI07732.1 Feature: domain Description: int Location: 2604890-2605889 bp Feature: domain Description: int Location: 2 604890-2 605889 bp Feature: gene Location: 2606107-2606358 bp Feature: gene Location: 2606358-2607842 bp Ori: QBI10475.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2606760-2607450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 606760-2 607450 bp Feature: gene Location: 2607941-2608885 bp Feature: gene Location: 2608897-2609775 bp Ori: QBI10476.1 Feature: domain Description: Phage_CI_repr Location: 2608924-2609107 bp Feature: domain Description: Phage_CI_repr Location: 2 60892 4-2 609107 bp Feature: domain Description: Phage_CI_repr Location: 2609236-2609428 bp Feature: domain Description: Phage_CI_repr Location: 2 6092 36-2 60942 8 bp Feature: domain Description: Phage_CI_C Location: 2609455-2609749 bp Feature: domain Description: Phage_CI_C Location: 2 609455-2 609749 bp Feature: gene Location: 2930226-2931587 bp Ori: QBI08025.1 Feature: domain Description: PRK05318 Location: 2930250-2931549 bp Feature: domain Description: PRK05318 Location: 2 9302 50-2 931549 bp Feature: gene Location: 2932177-2932428 bp Feature: gene Location: 2932428-2933912 bp Ori: QBI10495.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932830-2933520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 932 830-2 93352 0 bp Feature: gene Location: 2933991-2934224 bp Ori: QBI08027.1 Feature: domain Description: PRK10597 Location: 2933994-2934219 bp Feature: domain Description: PRK10597 Location: 2 933994-2 9342 19 bp Feature: gene Location: 2934236-2934526 bp Feature: gene Location: 3003248-3003490 bp Ori: QBI08098.1 Feature: domain Description: DinI Location: 3003299-3003479 bp Feature: domain Description: DinI Location: 30032 99-3003479 bp Feature: gene Location: 3003857-3004108 bp Feature: gene Location: 3004108-3005592 bp Ori: QBI10500.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3004510-3005200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3004510-30052 00 bp Feature: gene Location: 3005671-3006090 bp Ori: QBI08100.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3005674-3006085 bp Feature: domain Description: PRK102 76 Location: 3005674-3006085 bp Feature: gene Location: 3006093-3007358 bp Ori: QBI08101.1 Gene: umuC Feature: domain Description: umuC Location: 3006096-3007356 bp Feature: domain Description: umuC Location: 3006096-3007356 bp Feature: gene Location: 3155612-3155701 bp Feature: gene Location: 3156249-3156500 bp Feature: gene Location: 3156500-3157984 bp Ori: QBI10507.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3156902-3157592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3156902 -3157592 bp Feature: gene Location: 3158064-3158483 bp Ori: QBI08251.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3158067-3158478 bp Feature: domain Description: PRK102 76 Location: 3158067-3158478 bp Feature: gene Location: 3158485-3159750 bp Ori: QBI08252.1 Gene: umuC Feature: domain Description: umuC Location: 3158488-3159748 bp Feature: domain Description: umuC Location: 3158488-3159748 bp Feature: gene Location: 4398059-4398289 bp Feature: gene Location: 4399198-4401444 bp Ori: QBI09397.1 Feature: domain Description: AAA_15 Location: 4399201-4400209 bp Feature: domain Description: AAA_15 Location: 43992 01-44002 09 bp Feature: gene Location: 4401559-4402659 bp Ori: QBI09398.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4401742-4402270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4401742 -4402 2 70 bp Feature: gene Location: 4402906-4403148 bp Feature: gene Location: 4403218-4404321 bp Ori: QBI09399.1 Feature: domain Description: STKc_PknB_like Location: 4403350-4403791 bp Feature: domain Description: STKc_PknB_like Location: 4403350-4403791 bp Feature: gene Location: 4420825-4421883 bp Ori: QBI09417.1 Feature: domain Description: YccC Location: 4420831-4421869 bp Feature: domain Description: YccC Location: 442 0831-442 1869 bp Feature: gene Location: 4421982-4422455 bp Ori: QBI09418.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 4421985-4422444 bp Feature: domain Description: PRK10016 Location: 442 1985-442 2 444 bp Feature: gene Location: 4422537-4424021 bp Ori: QBI10580.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4422939-4423629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 2 939-442 362 9 bp Feature: gene Location: 4424021-4424272 bp Feature: gene Location: 4424542-4425711 bp Ori: QBI09420.1 Gene: dacD Feature: domain Description: dacD Location: 4424551-4425706 bp Feature: domain Description: dacD Location: 442 4551-442 5706 bp Feature: gene Location: 4884503-4884760 bp Feature: gene Location: 4884913-4885164 bp Feature: gene Location: 4885164-4886648 bp Ori: QBI10599.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4885566-4886256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4885566-48862 56 bp Feature: gene Location: 4886756-4886944 bp Feature: gene Location: 4886956-4887189 bp Ori: QBI09811.1 Feature: domain Description: DinI Location: 4887001-4887184 bp Feature: domain Description: DinI Location: 4887001-4887184 bp Feature: gene Location: 5046341-5046544 bp Feature: gene Location: 5046537-5046875 bp Feature: gene Location: 5046972-5048456 bp Ori: QBI10605.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5047374-5048064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5047374-5048064 bp Feature: gene Location: 5048456-5048707 bp Feature: gene Location: 5048937-5051321 bp Ori: QBI09971.1 Feature: domain Description: Phage_GPA Location: 5049501-5050467 bp Feature: domain Description: Phage_GPA Location: 5049501-5050467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), AAA_15 (pfam13175)
RVT-Retrons, STKc_PknB_like (cd14014), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), Phage_GPA (pfam05840)

Seq: CP036369.1 Klebsiella pneumoniae strain WCHKP115068 plasmid p2_115068, complete sequence (12746 bp)
Overview 1 RT 1: 2-3632 bp Neighborhood of RT #1 [2, 3632] Cloacin E2R135 RVT-GII Feature: gene Location: 2-1150 bp Feature: domain Description: Cloacin Location: 134-959 bp Feature: domain Description: Cloacin Location: 13 4-959 bp Feature: domain Description: E2R135 Location: 968-1151 bp Feature: domain Description: E2R13 5 Location: 968-1151 bp Feature: gene Location: 1255-2739 bp Ori: QBI10846.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1657-2347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1657-23 47 bp Feature: gene Location: 2739-2990 bp Feature: gene Location: 3387-3632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cloacin (pfam03515), E2R135 (pfam11570), RVT-GII