myRT

myRT report for GCA_004328515.1_ASM432851v1

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Seq: CP036491.1 Bacteroides sp. A1C1 chromosome, complete genome (4502190 bp)
Overview 1 RT 1: 517496-521805 bp 2 RT 2: 599368-608852 bp Neighborhood of RT #1 [517496, 522530] RVT-GII Intron_maturas2 Toprim_2 Mob_Pre Neighborhood of RT #2 [599368, 608857] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc DUF4141 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3875 Feature: gene Location: 517496-517663 bp Feature: gene Location: 517768-518191 bp Feature: gene Location: 518226-520034 bp Ori: QBJ17284.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 518490-519312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 8490-51 931 2 bp Feature: domain Description: Intron_maturas2 Location: 519381-519690 bp Feature: domain Description: Intron_maturas2 Location: 51 9381 -51 9690 bp Feature: gene Location: 520024-520971 bp Ori: QBJ17285.1 Feature: domain Description: Toprim_2 Location: 520558-520846 bp Feature: domain Description: Toprim_2 Location: 520558-520846 bp Feature: gene Location: 521172-522530 bp Ori: QBJ17286.1 Feature: domain Description: Mob_Pre Location: 521181-521805 bp Feature: domain Description: Mob_Pre Location: 521 1 81 -521 805 bp Feature: gene Location: 599368-600381 bp Ori: QBJ17341.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 599389-600352 bp Feature: domain Description: Bac_Flav_CT_J Location: 599389-600352 bp Feature: gene Location: 600409-600720 bp Feature: gene Location: 600938-602743 bp Ori: QBJ17342.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601202-602024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601 202-602024 bp Feature: domain Description: Intron_maturas2 Location: 602183-602552 bp Feature: domain Description: Intron_maturas2 Location: 6021 83-602552 bp Feature: domain Description: HNHc Note: nucleases Location: 602576-602717 bp Feature: domain Description: HNHc Note: nucleases Location: 602576-60271 7 bp Feature: gene Location: 603294-603494 bp Ori: QBJ20292.1 Feature: domain Description: DUF4141 Location: 603300-603435 bp Feature: domain Description: DUF41 41 Location: 603300-603435 bp Feature: gene Location: 603525-603800 bp Feature: gene Location: 603939-604547 bp Ori: QBJ17344.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 604056-604515 bp Feature: domain Description: Bac_Flav_CT_G Location: 604056-60451 5 bp Feature: gene Location: 604556-606202 bp Ori: QBJ17345.1 Gene: ltrA Feature: domain Description: RVT_N Location: 604610-604853 bp Feature: domain Description: RVT_N Location: 60461 0-604853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604898-605543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604898-605543 bp Feature: domain Description: GIIM Note: maturase Location: 605597-605828 bp Feature: domain Description: GIIM Note: maturase Location: 605597-605828 bp Feature: gene Location: 606833-608677 bp Ori: QBJ17346.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 606836-608675 bp Feature: domain Description: Bac_Flav_CT_G Location: 606836-608675 bp Feature: gene Location: 608687-608857 bp Ori: QBJ17347.1 Feature: domain Description: DUF3875 Location: 608705-608852 bp Feature: domain Description: DUF3875 Location: 608705-608852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), Mob_Pre (pfam01076), Bac_Flav_CT_J (TIGR03782), HNHc (smart00507), DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388)
DUF3875 (pfam12991)