myRT

myRT report for GCA_004328575.1_ASM432857v1

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Seq: CP036500.1 Vibrio cholerae strain 20000 chromosome 2, complete sequence (1110356 bp)
Overview 1 RT 1: 194951-199824 bp 2 RT 2: 289985-294661 bp Neighborhood of RT #1 [194951, 199824] PRK05096 RVT-Retrons Trypsin_2 Neighborhood of RT #2 [289985, 294876] Dam Dam phage_xxxx phage_xxxx RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 194951-195328 bp Feature: gene Location: 195493-196536 bp Ori: QBJ30568.1 Feature: domain Description: PRK05096 Location: 195496-196528 bp Feature: domain Description: PRK05096 Location: 1 95496-1 96528 bp Feature: gene Location: 197173-198927 bp Ori: QBJ30569.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 197383-197986 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 97383-1 97986 bp Feature: domain Description: Trypsin_2 Location: 198379-198811 bp Feature: domain Description: Trypsin_2 Location: 1 98379-1 9881 1 bp Feature: gene Location: 199378-199458 bp Feature: gene Location: 199618-199824 bp Feature: gene Location: 289985-290617 bp Ori: QBJ30647.1 Feature: domain Description: Dam Location: 290006-290147 bp Feature: domain Description: Dam Location: 290006-2901 47 bp Feature: domain Description: Dam Location: 290246-290531 bp Feature: domain Description: Dam Location: 290246-290531 bp Feature: gene Location: 290619-291212 bp Ori: QBJ30648.1 Feature: domain Description: phage_xxxx Location: 290631-290850 bp Feature: domain Description: phage_xxxx Location: 290631 -290850 bp Feature: domain Description: phage_xxxx Location: 290937-291195 bp Feature: domain Description: phage_xxxx Location: 290937-291 1 95 bp Feature: gene Location: 291470-292453 bp Ori: QBJ30649.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 291620-292217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 291 620-29221 7 bp Feature: gene Location: 292455-294074 bp Ori: QBJ30650.1 Feature: domain Description: COG3950 Location: 292662-294003 bp Feature: domain Description: COG3950 Location: 292662-294003 bp Feature: gene Location: 294079-294876 bp Ori: QBJ30651.1 Feature: domain Description: TIGR02646 Location: 294184-294661 bp Feature: domain Description: TIGR02646 Location: 2941 84-294661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional), RVT-Retrons, Trypsin_2 (pfam13365), Dam (pfam05869), phage_xxxx (TIGR02642), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)