myRT

myRT report for GCA_004328765.1_ASM432876v1

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Seq: CP025280.1 Salmonella enterica subsp. enterica strain USDA-ARS-USMARC-60983 chromosome, complete genome (4662027 bp)
Overview 1 RT 1: 677789-680125 bp 2 RT 2: 1159188-1163900 bp Neighborhood of RT #1 [677789, 680125] HTH_XRE RVT-Retrons Neighborhood of RT #2 [1159188, 1163905] HTH_23 HTH_33 DDE_3 RVT-Retrons DUF4756 Feature: gene Location: 677789-678088 bp Feature: gene Location: 678125-678433 bp Ori: QBJ36034.1 Feature: domain Description: HTH_XRE Location: 678137-678302 bp Feature: domain Description: HTH_XRE Location: 6781 37-678302 bp Feature: gene Location: 678411-679361 bp Ori: QBJ36035.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678591-679134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678591 -6791 34 bp Feature: gene Location: 679501-679932 bp Feature: gene Location: 679931-680125 bp Feature: gene Location: 1159188-1159484 bp Feature: gene Location: 1159582-1160613 bp Feature: domain Description: HTH_23 Location: 1159675-1159801 bp Feature: domain Description: HTH_23 Location: 1 1 59675-1 1 59801 bp Feature: domain Description: HTH_33 Location: 1159906-1160053 bp Feature: domain Description: HTH_33 Location: 1 1 59906-1 1 60053 bp Feature: domain Description: DDE_3 Location: 1160113-1160530 bp Feature: domain Description: DDE_3 Location: 1 1 601 1 3-1 1 60530 bp Feature: gene Location: 1160756-1161649 bp Ori: QBJ39753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1160852-1161401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 60852-1 1 61 401 bp Feature: gene Location: 1162026-1162904 bp Feature: gene Location: 1163426-1163905 bp Feature: domain Description: DUF4756 Location: 1163429-1163900 bp Feature: domain Description: DUF4756 Location: 1 1 63429-1 1 63900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358), DUF4756 (pfam15948)