myRT

myRT report for GCA_004332015.1_ASM433201v1

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Seq: CP028720.1 Enterococcus faecalis strain CVM N48037F chromosome, complete genome (2997828 bp)
Overview 1 RT 1: 274074-282602 bp 2 RT 2: 293960-298100 bp Neighborhood of RT #1 [274074, 282778] RVT-GII Phage_lysozyme2 PRK08581 TraC-F-type Neighborhood of RT #2 [293960, 298429] RusA DUF4373 DnaD_dom RVT-GII GIIM PRK07983 Feature: gene Location: 274074-274274 bp Feature: gene Location: 274306-274932 bp Feature: gene Location: 275205-277139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275529-276264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275529-276264 bp Feature: gene Location: 277863-280376 bp Feature: domain Description: Phage_lysozyme2 Location: 279495-280020 bp Feature: domain Description: Phage_lysozyme2 Location: 279495-280020 bp Feature: domain Description: PRK08581 Location: 280140-280359 bp Feature: domain Description: PRK08581 Location: 2801 40-280359 bp Feature: gene Location: 280388-282778 bp Feature: domain Description: TraC-F-type Location: 280808-282602 bp Feature: domain Description: TraC-F-type Location: 280808-282602 bp Feature: gene Location: 293960-294109 bp Feature: domain Description: RusA Location: 293963-294089 bp Feature: domain Description: RusA Location: 293963-294089 bp Feature: gene Location: 294384-295352 bp Feature: domain Description: DUF4373 Location: 294417-294696 bp Feature: domain Description: DUF4373 Location: 29441 7-294696 bp Feature: domain Description: DnaD_dom Location: 294963-295167 bp Feature: domain Description: DnaD_dom Location: 294963-2951 67 bp Feature: gene Location: 295534-296856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295834-296470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295834-296470 bp Feature: domain Description: GIIM Note: maturase Location: 296542-296758 bp Feature: domain Description: GIIM Note: maturase Location: 296542-296758 bp Feature: gene Location: 297112-297282 bp Feature: gene Location: 297446-298429 bp Feature: domain Description: PRK07983 Location: 297758-298100 bp Feature: domain Description: PRK07983 Location: 297758-2981 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RusA (pfam05866), DUF4373 (pfam14297), DnaD_dom (TIGR01446), GIIM (pfam08388), PRK07983 (exodeoxyribonuclease X; Provisional)

Seq: CP028721.1 Enterococcus faecalis strain CVM N48037F plasmid pN48037F-1, complete sequence (62234 bp)
Overview 1 RT 1: 3555-9529 bp Neighborhood of RT #1 [3555, 9540] TRX_family RVT-GII Glucosaminidase PRK08581 Gram_pos_anchor Feature: gene Location: 3555-3971 bp Feature: domain Description: TRX_family Location: 3702-3897 bp Feature: domain Description: TRX_family Location: 3702 -3897 bp Feature: gene Location: 3955-4572 bp Feature: gene Location: 4842-6776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5166-5901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5166-5901 bp Feature: gene Location: 7500-8651 bp Feature: domain Description: Glucosaminidase Location: 7707-8142 bp Feature: domain Description: Glucosaminidase Location: 7707-8142 bp Feature: domain Description: PRK08581 Location: 8406-8634 bp Feature: domain Description: PRK08581 Location: 8406-8634 bp Feature: gene Location: 8677-9540 bp Feature: domain Description: Gram_pos_anchor Location: 9415-9529 bp Feature: domain Description: Gram_pos_anchor Location: 9415-952 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_family (cd02947), RVT-GII, Glucosaminidase (pfam01832), PRK08581 (amidase domain-containing protein), Gram_pos_anchor (pfam00746)

Seq: CP028722.1 Enterococcus faecalis strain CVM N48037F plasmid pN48037F-2, complete sequence (50811 bp)
Overview 1 RT 1: 38416-44336 bp Neighborhood of RT #1 [38416, 44410] Gram_pos_anchor Glucosaminidase PRK08581 RVT-GII TRX_family Feature: gene Location: 38416-39288 bp Feature: domain Description: Gram_pos_anchor Location: 39163-39277 bp Feature: domain Description: Gram_pos_anchor Location: 3 9163 -3 9277 bp Feature: gene Location: 39314-40465 bp Feature: domain Description: Glucosaminidase Location: 39521-39956 bp Feature: domain Description: Glucosaminidase Location: 3 9521-3 9956 bp Feature: domain Description: PRK08581 Location: 40220-40448 bp Feature: domain Description: PRK08581 Location: 40220-40448 bp Feature: gene Location: 41189-43123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41513-42248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41513 -42248 bp Feature: gene Location: 43393-44010 bp Feature: gene Location: 43994-44410 bp Feature: domain Description: TRX_family Location: 44141-44336 bp Feature: domain Description: TRX_family Location: 44141-443 3 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gram_pos_anchor (pfam00746), Glucosaminidase (pfam01832), PRK08581 (amidase domain-containing protein), RVT-GII, TRX_family (cd02947)

Seq: CP028723.1 Enterococcus faecalis strain CVM N48037F plasmid pN48037F-3, complete sequence (40269 bp)
Overview 1 RT 1: 34073-38462 bp Neighborhood of RT #1 [34073, 39019] SR_ResInv HTH_Hin_like RVT-Retrons PemK_toxin Relaxase Feature: gene Location: 34073-34849 bp Feature: gene Location: 34883-35461 bp Feature: domain Description: SR_ResInv Location: 34889-35261 bp Feature: domain Description: SR_ResInv Location: 34 889-35261 bp Feature: domain Description: HTH_Hin_like Location: 35303-35420 bp Feature: domain Description: HTH_Hin_like Location: 35303-354 20 bp Feature: gene Location: 36231-37196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36366-36921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36366-36921 bp Feature: gene Location: 37302-37667 bp Feature: domain Description: PemK_toxin Location: 37329-37656 bp Feature: domain Description: PemK_toxin Location: 37329-37656 bp Feature: gene Location: 37718-39019 bp Feature: domain Description: Relaxase Location: 37757-38462 bp Feature: domain Description: Relaxase Location: 37757-384 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), HTH_Hin_like (cd00569), RVT-Retrons, PemK_toxin (pfam02452), Relaxase (pfam03432)