myRT

myRT report for GCA_004345205.1_ASM434520v1

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Seq: CP036220.1 Mycobacterium avium subsp. hominissuis strain mc2 2500 chromosome, complete genome (5438093 bp)
Overview 1 RT 1: 4103375-4109218 bp 2 RT 2: 4116431-4120872 bp Neighborhood of RT #1 [4103375, 4109238] CypX TetR_N TetR_C_35 RVT-GII GIIM MhpC Neighborhood of RT #2 [4116431, 4121248] HTH_17 Tra8 RVT-GII GIIM Transposase_mut INT_tnpB_C_Tn554 Feature: gene Location: 4103375-4104676 bp Ori: QBI69371.1 Feature: domain Description: CypX Location: 4103450-4104665 bp Feature: domain Description: CypX Location: 41 03450-41 04665 bp Feature: gene Location: 4104764-4105393 bp Ori: QBI69372.1 Feature: domain Description: TetR_N Location: 4104821-4104953 bp Feature: domain Description: TetR_N Location: 41 04821 -41 04953 bp Feature: domain Description: TetR_C_35 Location: 4105022-4105355 bp Feature: domain Description: TetR_C_35 Location: 41 05022-41 05355 bp Feature: gene Location: 4106101-4107549 bp Ori: QBI69373.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4106419-4107106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 0641 9-41 071 06 bp Feature: domain Description: GIIM Note: maturase Location: 4107181-4107376 bp Feature: domain Description: GIIM Note: maturase Location: 41 071 81 -41 07376 bp Feature: gene Location: 4108079-4108294 bp Feature: gene Location: 4108342-4109238 bp Ori: QBI69375.1 Feature: domain Description: MhpC Location: 4108366-4109218 bp Feature: domain Description: MhpC Location: 41 08366-41 0921 8 bp Feature: gene Location: 4116431-4116613 bp Ori: QBI70776.1 Feature: domain Description: HTH_17 Location: 4116434-4116602 bp Feature: domain Description: HTH_1 7 Location: 41 1 6434-41 1 6602 bp Feature: gene Location: 4116700-4117158 bp Feature: domain Description: Tra8 Location: 4116712-4117129 bp Feature: domain Description: Tra8 Location: 41 1 671 2-41 1 71 29 bp Feature: gene Location: 4117274-4118785 bp Ori: QBI69379.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4117655-4118339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 7655-41 1 8339 bp Feature: domain Description: GIIM Note: maturase Location: 4118414-4118630 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 841 4-41 1 8630 bp Feature: gene Location: 4119053-4119274 bp Feature: domain Description: Transposase_mut Location: 4119056-4119176 bp Feature: domain Description: Transposase_mut Location: 41 1 9056-41 1 91 76 bp Feature: gene Location: 4119318-4121248 bp Feature: domain Description: INT_tnpB_C_Tn554 Location: 4120707-4120872 bp Feature: domain Description: INT_tnpB_C_Tn554 Location: 41 20707-41 20872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CypX (COG2124), TetR_N (pfam00440), TetR_C_35 (pfam18556), RVT-GII, GIIM (pfam08388), MhpC (COG0596), HTH_17 (pfam12728), Tra8 (COG2826), Transposase_mut (pfam00872), INT_tnpB_C_Tn554 (cd01187)