myRT

myRT report for GCA_004354345.1_ASM435434v1

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Seq: CP037914.1 Sphingomonas sp. AAP5 plasmid p213, complete sequence (213080 bp)
Overview 1 RT 1: 14873-18979 bp Neighborhood of RT #1 [14873, 18979] RVT-GII group_II_RT_mat Feature: gene Location: 14873-15517 bp Feature: gene Location: 15557-15847 bp Feature: gene Location: 16335-18311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16701-17538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6701 -1 7538 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17739-17877 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 7739-1 7877 bp Feature: gene Location: 18354-18734 bp Feature: gene Location: 18767-18979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: CP037913.1 Sphingomonas sp. AAP5 chromosome, complete genome (3987367 bp)
Overview 1 RT 1: 276151-282268 bp 2 RT 2: 2004140-2010510 bp Neighborhood of RT #1 [276151, 282375] TonB_C uvrA RVT-UG7 PhdYeFM_antitox Neighborhood of RT #2 [2004140, 2010554] arc_metj PRK13876 RVT-GII GIIM CzcD COG4705 Feature: gene Location: 276151-276957 bp Ori: QBM74518.1 Feature: domain Description: TonB_C Location: 276721-276952 bp Feature: domain Description: TonB_C Location: 2 7672 1-2 76952 bp Feature: gene Location: 277058-279940 bp Ori: QBM74519.1 Gene: uvrA Feature: domain Description: uvrA Location: 277067-279932 bp Feature: domain Description: uvrA Location: 2 77067-2 79932 bp Feature: gene Location: 279900-281624 bp Ori: QBM74520.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 280329-280707 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 8032 9-2 80707 bp Feature: gene Location: 281697-282134 bp Feature: gene Location: 282094-282375 bp Ori: QBM74522.1 Feature: domain Description: PhdYeFM_antitox Location: 282109-282268 bp Feature: domain Description: PhdYeFM_antitox Location: 2 82 109-2 82 2 68 bp Feature: gene Location: 2004140-2004541 bp Ori: QBM75936.1 Feature: domain Description: arc_metj Location: 2004152-2004269 bp Feature: domain Description: arc_metj Location: 2 004152 -2 0042 69 bp Feature: gene Location: 2004538-2006598 bp Ori: QBM77733.1 Feature: domain Description: PRK13876 Location: 2004541-2006554 bp Feature: domain Description: PRK13876 Location: 2 004541-2 006554 bp Feature: gene Location: 2007205-2008599 bp Ori: QBM75937.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2007559-2008222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 007559-2 0082 2 2 bp Feature: domain Description: GIIM Note: maturase Location: 2008291-2008507 bp Feature: domain Description: GIIM Note: maturase Location: 2 0082 91-2 008507 bp Feature: gene Location: 2009111-2009713 bp Ori: QBM75938.1 Feature: domain Description: CzcD Location: 2009150-2009699 bp Feature: domain Description: CzcD Location: 2 009150-2 009699 bp Feature: gene Location: 2009706-2010554 bp Ori: QBM75939.1 Feature: domain Description: COG4705 Location: 2009802-2010510 bp Feature: domain Description: COG4705 Location: 2 009802 -2 010510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), uvrA (PRK00349), RVT-UG7, PhdYeFM_antitox (pfam02604), arc_metj (LOAD_arc_metj), PRK13876 (conjugal transfer coupling protein TraG; Provisional), RVT-GII, GIIM (pfam08388), CzcD (COG1230), COG4705 (Uncharacterized membrane-anchored protein )