myRT report for GCA_004358345.1_ASM435834v1
Download annotations/find similar RTs
Seq: CP037952.1 Parashewanella spongiae strain HJ039 chromosome, complete genome (5468749 bp)
Associated domains:myRT
| RVT-GII | , GIIM (pfam08388) | , fieF (PRK09509) | , PRK10455 (periplasmic protein; Reviewed) | , Porin_7 (pfam16956) | , PPR (TIGR00756) | , SPRY_HERC1 (cd12881) | , zf-C3HC4_3 (pfam13920) | , dCache_1 (pfam02743) | , Tar (COG0840) |
PRK10748 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB), XerC (COG4973) | , PPR_3 (pfam13812) | , ANK (smart00248) | , DDE_Tnp_1_assoc (pfam13808) | , YhhI (COG5433) | , HTH_32 (pfam13565) | , DDE_3 (pfam13358) | , Curlin_rpt (pfam07012) | , Lactonase (pfam10282) |
CusA (COG3696), HlyD_D23 (pfam16576) | , Imp-YgjV (pfam10688) | , RraA_entero (TIGR02998) | , DDE_Tnp_IS66 (pfam03050) | , PRK10929 (putative mechanosensitive channel protein; Provisional) | , DDE_Tnp_1_3 (pfam13612) | , PRK11059 (regulatory protein CsrD; Provisional) | , COG3547 (Transposase ) | , PLN03218 (maturation of RBCL 1; Provisional) |
PRK05255 (ribosome-associated protein), Exo_endo_phos (pfam03372) | , COG2991 (Uncharacterized protein ) | , YgdD (COG2363) | , PRK11760 (putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional) | , DDE_Tnp_IS1 (pfam03400) | , FepD (COG0609) | , DDE_Tnp_1 (pfam01609) | , TonB-Xanth-Caul (TIGR01782) | , HHH_3 (pfam12836) |
dCache_3 (pfam14827), HK_WalK (NF033092) | , PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional) | , Peptidase_M56 (pfam05569) | , TonB (COG0810) | , COG3682 (Predicted transcriptional regulator ) | , group_II_RT_mat (TIGR04416) | , PRK10691 (fumarylacetoacetate hydrolase family protein) | , PRK04949 (putative sulfate transport protein CysZ; Validated) | , TnpB_IS66 (pfam05717) |
RVT_N (pfam13655), YejM (COG3083) | , RfbB (COG1088) | , rmlA (TIGR01207) | , PRK11756 (exonuclease III; Provisional) | , PRK11370 (YciI family protein) | , RVT-Retrons | , RVT-CRISPR | , STKc_Rim15_like (cd05611) | , ParD (pfam09386) |
ParE (COG3668), ddl (PRK01966) | , recD (TIGR01447) | , Pro_racemase (pfam05544) | , DadA (COG0665) | , HTH_29 (pfam13551) | , RelB (pfam04221) | , PRK00215 (transcriptional repressor LexA) | , DCR_FMN (cd02930) | , PRK11749 (dihydropyrimidine dehydrogenase subunit A; Provisional) |
mycofact_OYE_2 (TIGR03997), tppB (PRK09584) | , rnd (TIGR01388) | , PaiB (COG2808) | , PerM (COG0628) | , PRK11716 (HTH-type transcriptional activator IlvY) | , PRK05225 (ketol-acid reductoisomerase; Validated) | , PRK10713 (2Fe-2S ferredoxin-like protein) | , PRK11776 (ATP-dependent RNA helicase DbpA; Provisional) | , COG4590 (ABC-type uncharacterized transport system, permease component ) |
CBS_pair_bac (cd17788), ABC2_membrane_2 (pfam12679) | , PRK12755 (phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional) | , rne (PRK10811) | , SUL1 (COG0659) | , PRK05550 (bifunctional methionine sulfoxide reductase B/A protein; Provisional) | , PRK10526 (acyl-CoA thioesterase II; Provisional) | , PRK06080 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated) | , PRK09287 (NADP-dependent phosphogluconate dehydrogenase) | , S24_LexA-like (cd06529) |
UPF0236 (pfam06782), MiaE (pfam06175) | , DUF1282 (pfam06930) | , PRK05347 (glutaminyl-tRNA synthetase; Provisional) | , tyrA (PRK11199) | , FeoB (COG0370) | , RING-H2_BRAP2 (cd16457) | , RluA (COG0564) | , RsmB (COG0144) | , DDE_Tnp_ISAZ013 (pfam07592) |
NhaC (COG1757), KOG3954 (KOG3954, Electron transfer flavoprotein, alpha subunit ) | , DUF4442 (pfam14539) | , DUF368 (pfam04018) | , PRK11068 (phosphatidylglycerophosphatase A; Provisional) | , CBS_pair_AcuB_like (cd04584) | , PRK10865 (ATP-dependent chaperone ClpB) | , CHD (cd07302) | , RVT-UG3 | , RVT-UG8 |
STKc_PknB_like (cd14014), PRK05677 (long-chain-fatty-acid--CoA ligase; Validated) | , FC-FACS_FadD_like (cd05936) | , Ank_2 (pfam12796) | , PRK11823 (DNA repair protein RadA; Provisional) | , PilZ (pfam07238) | , PRK11189 (lipoprotein NlpI; Provisional) | , polynuc_phos (TIGR03591) | , DUF2390 (pfam09523) | , MhpC (COG0596) |
PRK11753 (cAMP-activated global transcriptional regulator CRP), ggt (PRK09615) | , AcrR (COG1309) | , PRK14994 (SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional) | , psd (PRK00044) | , TTQ_mauG (TIGR03791) | , quinone_pig3 (TIGR02824) | , PRK03846 (adenylylsulfate kinase; Provisional) | , SLC13_permease (cd01115) | , YkfC (COG3344) |
PRK13165 (cytochrome c maturation protein CcmE), Death (pfam00531) |
