myRT

myRT report for GCA_004358385.1_ASM435838v1

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Seq: CP037941.1 Escherichia coli strain CFSAN027350 chromosome, complete genome (5436079 bp)
Overview 1 RT 1: 3920711-3924631 bp 2 RT 2: 5193711-5197526 bp Neighborhood of RT #1 [3920711, 3924633] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Antirestrict Neighborhood of RT #2 [5193711, 5197526] HTH_Tnp_1 RVT-GII Intron_maturas2 DUF932 Feature: gene Location: 3920711-3920845 bp Feature: gene Location: 3920866-3921246 bp Feature: domain Description: DUF932 Location: 3920974-3921244 bp Feature: domain Description: DUF932 Location: 3920974-3921 244 bp Feature: gene Location: 3921756-3923534 bp Ori: QBO46646.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3922017-3922812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392201 7-392281 2 bp Feature: domain Description: Intron_maturas2 Location: 3922938-3923163 bp Feature: domain Description: Intron_maturas2 Location: 3922938-39231 63 bp Feature: domain Description: HNHc Note: nucleases Location: 3923358-3923508 bp Feature: domain Description: HNHc Note: nucleases Location: 3923358-3923508 bp Feature: gene Location: 3923653-3924093 bp Feature: domain Description: DUF932 Location: 3923665-3924058 bp Feature: domain Description: DUF932 Location: 3923665-3924058 bp Feature: gene Location: 3924148-3924633 bp Ori: QBO46647.1 Feature: domain Description: Antirestrict Location: 3924346-3924631 bp Feature: domain Description: Antirestrict Location: 3924346-3924631 bp Feature: gene Location: 5193711-5193960 bp Ori: QBO47798.1 Feature: domain Description: HTH_Tnp_1 Location: 5193720-5193933 bp Feature: domain Description: HTH_Tnp_1 Location: 51 93720-51 93933 bp Feature: gene Location: 5193960-5194867 bp Feature: gene Location: 5194910-5196496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5195171-5195966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 951 71 -51 95966 bp Feature: domain Description: Intron_maturas2 Location: 5196092-5196317 bp Feature: domain Description: Intron_maturas2 Location: 51 96092-51 9631 7 bp Feature: gene Location: 5197006-5197389 bp Feature: domain Description: DUF932 Location: 5197117-5197387 bp Feature: domain Description: DUF932 Location: 51 971 1 7-51 97387 bp Feature: gene Location: 5197410-5197526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230), HTH_Tnp_1 (pfam01527)