myRT

myRT report for GCA_004379295.1_ASM437929v1

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Seq: CP038012.1 Sporosarcina pasteurii strain BNCC 337394 chromosome, complete genome (3253966 bp)
Overview 1 RT 1: 826402-835230 bp 2 RT 2: 1641345-1649147 bp 3 RT 3: 2301588-2310924 bp Neighborhood of RT #1 [826402, 835241] PBP2_Ylib_like RVT-GII HNHc antiport_nhaC PhoA Neighborhood of RT #2 [1641345, 1649191] Zn_pept Aes RVT-Retrons antiport_nhaC Neighborhood of RT #3 [2301588, 2310929] DUF2922 AAA_16 MarR RVT-GII HNHc LasB Feature: gene Location: 826402-826947 bp Feature: gene Location: 827422-829017 bp Ori: QBQ04890.1 Feature: domain Description: PBP2_Ylib_like Location: 827560-829000 bp Feature: domain Description: PBP2_Ylib_like Location: 827560-829000 bp Feature: gene Location: 829191-830990 bp Ori: QBQ04891.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829488-830187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829488-8301 87 bp Feature: domain Description: HNHc Note: nucleases Location: 830724-830865 bp Feature: domain Description: HNHc Note: nucleases Location: 830724-830865 bp Feature: gene Location: 832230-833708 bp Ori: QBQ04892.1 Gene: nhaC Feature: domain Description: antiport_nhaC Location: 832263-833607 bp Feature: domain Description: antiport_nhaC Location: 832263-833607 bp Feature: gene Location: 833964-835241 bp Ori: QBQ07052.1 Feature: domain Description: PhoA Location: 834027-835230 bp Feature: domain Description: PhoA Location: 834027-835230 bp Feature: gene Location: 1641345-1642535 bp Ori: QBQ05619.1 Feature: domain Description: Zn_pept Location: 1641471-1642116 bp Feature: domain Description: Zn_pept Location: 1 641 471 -1 6421 1 6 bp Feature: gene Location: 1643182-1644126 bp Ori: QBQ05620.1 Feature: domain Description: Aes Location: 1643233-1644103 bp Feature: domain Description: Aes Location: 1 643233-1 6441 03 bp Feature: gene Location: 1644262-1645236 bp Ori: QBQ05621.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1644418-1644979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 64441 8-1 644979 bp Feature: gene Location: 1645940-1647190 bp Feature: gene Location: 1647776-1649191 bp Ori: QBQ07097.1 Gene: nhaC Feature: domain Description: antiport_nhaC Location: 1647806-1649147 bp Feature: domain Description: antiport_nhaC Location: 1 647806-1 6491 47 bp Feature: gene Location: 2301588-2301806 bp Ori: QBQ06178.1 Feature: domain Description: DUF2922 Location: 2301597-2301795 bp Feature: domain Description: DUF2922 Location: 2301 597-2301 795 bp Feature: gene Location: 2302165-2304327 bp Ori: QBQ06179.1 Feature: domain Description: AAA_16 Location: 2302348-2303044 bp Feature: domain Description: AAA_1 6 Location: 2302348-2303044 bp Feature: domain Description: MarR Location: 2304058-2304319 bp Feature: domain Description: MarR Location: 2304058-230431 9 bp Feature: gene Location: 2304578-2306377 bp Ori: QBQ06180.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2304875-2305574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2304875-2305574 bp Feature: domain Description: HNHc Note: nucleases Location: 2306111-2306252 bp Feature: domain Description: HNHc Note: nucleases Location: 23061 1 1 -2306252 bp Feature: gene Location: 2307450-2308664 bp Feature: gene Location: 2309232-2310929 bp Ori: QBQ06182.1 Feature: domain Description: LasB Location: 2309292-2310924 bp Feature: domain Description: LasB Location: 2309292-231 0924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_Ylib_like (cd08499), RVT-GII, HNHc (smart00507), antiport_nhaC (TIGR00931), PhoA (COG1785), Zn_pept (smart00631), Aes (COG0657), RVT-Retrons, DUF2922 (pfam11148), AAA_16 (pfam13191)
MarR (pfam01047), LasB (COG3227)