myRT

myRT report for GCA_004421005.1_ASM442100v1

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Seq: CP038026.1 Massilia plicata strain DSM 17505 chromosome, complete genome (5887622 bp)
Overview 1 RT 1: 3397803-3407022 bp 2 RT 2: 5546691-5555760 bp Neighborhood of RT #1 [3397803, 3407022] WGR_DNA_ligase RVT-Retrons HTH_Tnp_1 Neighborhood of RT #2 [5546691, 5555760] PRK10060 TIR_2 RVT-G2L Tae4 Feature: gene Location: 3397803-3400847 bp Ori: QBQ37310.1 Feature: domain Description: WGR_DNA_ligase Location: 3397866-3398037 bp Feature: domain Description: WGR_DNA_ligase Location: 3397866-3398037 bp Feature: gene Location: 3400844-3402502 bp Feature: gene Location: 3402831-3404675 bp Ori: QBQ37312.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3403386-3404001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3403386-3404001 bp Feature: gene Location: 3405872-3406112 bp Ori: QBQ37313.1 Feature: domain Description: HTH_Tnp_1 Location: 3405884-3406082 bp Feature: domain Description: HTH_Tnp_1 Location: 3405884-3406082 bp Feature: gene Location: 3406112-3407022 bp Feature: gene Location: 5546691-5548727 bp Ori: QBQ38946.1 Feature: domain Description: PRK10060 Location: 5547051-5548698 bp Feature: domain Description: PRK1 0060 Location: 5547051 -5548698 bp Feature: gene Location: 5549583-5552069 bp Ori: QBQ38947.1 Feature: domain Description: TIR_2 Location: 5549595-5549877 bp Feature: domain Description: TIR_2 Location: 5549595-5549877 bp Feature: gene Location: 5552810-5554066 bp Ori: QBQ38948.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 5553083-5553740 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 5553083-5553740 bp Feature: gene Location: 5554350-5554967 bp Ori: QBQ38949.1 Feature: domain Description: Tae4 Location: 5554617-5554956 bp Feature: domain Description: Tae4 Location: 555461 7-5554956 bp Feature: gene Location: 5555404-5555760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, HTH_Tnp_1 (pfam01527), PRK10060 (cyclic di-GMP phosphodiesterase), TIR_2 (pfam13676), RVT-G2L, Tae4 (pfam14113)