myRT

myRT report for GCA_004519515.1_ASM451951v1

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Seq: CP038145.1 Actinobacillus indolicus strain AIFJ1607 chromosome, complete genome (2251645 bp)
Overview 1 RT 1: 408-5654 bp 2 RT 2: 1303239-1312612 bp 3 RT 3: 2229466-2235277 bp Neighborhood of RT #1 [408, 5656] rplM rpsI RVT_N RVT-GII YaaA YaaA Neighborhood of RT #2 [1303239, 1312617] SseA SseA SseA Sulf_transp RVT_N RVT-GII GIIM HNHc EF-Tu EF-G Neighborhood of RT #3 [2229466, 2235277] rplM rpsI RVT_N RVT-GII GIIM HNHc PRK02101 Feature: gene Location: 408-835 bp Gene: rplM Feature: domain Description: rplM Location: 411-627 bp Feature: domain Description: rplM Location: 41 1 -627 bp Feature: gene Location: 851-1245 bp Gene: rpsI Feature: domain Description: rpsI Location: 863-1073 bp Feature: domain Description: rpsI Location: 863-1 073 bp Feature: gene Location: 2987-4709 bp Gene: ltrA Feature: domain Description: RVT_N Location: 3056-3296 bp Feature: domain Description: RVT_N Location: 3056-3296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3770 bp Feature: gene Location: 4732-4920 bp Feature: gene Location: 4886-5656 bp Gene: yaaA Feature: domain Description: YaaA Location: 4889-5069 bp Feature: domain Description: YaaA Location: 4889-5069 bp Feature: domain Description: YaaA Location: 5435-5654 bp Feature: domain Description: YaaA Location: 5435-5654 bp Feature: gene Location: 1303239-1304606 bp Ori: QBQ63898.1 Feature: domain Description: SseA Location: 1303296-1303458 bp Feature: domain Description: SseA Location: 1 303296-1 303458 bp Feature: domain Description: SseA Location: 1303470-1303554 bp Feature: domain Description: SseA Location: 1 303470-1 303554 bp Feature: domain Description: SseA Location: 1303662-1304526 bp Feature: domain Description: SseA Location: 1 303662-1 304526 bp Feature: gene Location: 1304668-1305684 bp Ori: QBQ63899.1 Feature: domain Description: Sulf_transp Location: 1304719-1305646 bp Feature: domain Description: Sulf_transp Location: 1 30471 9-1 305646 bp Feature: gene Location: 1305969-1307693 bp Ori: QBQ63900.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1306044-1306287 bp Feature: domain Description: RVT_N Location: 1 306044-1 306287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306332-1306986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 306332-1 306986 bp Feature: domain Description: GIIM Note: maturase Location: 1307040-1307271 bp Feature: domain Description: GIIM Note: maturase Location: 1 307040-1 307271 bp Feature: domain Description: HNHc Note: nucleases Location: 1307493-1307655 bp Feature: domain Description: HNHc Note: nucleases Location: 1 307493-1 307655 bp Feature: gene Location: 1309258-1310445 bp Ori: QBQ63901.1 Gene: tuf Feature: domain Description: EF-Tu Location: 1309261-1310443 bp Feature: domain Description: EF-Tu Location: 1 309261 -1 31 0443 bp Feature: gene Location: 1310515-1312617 bp Ori: QBQ63902.1 Gene: fusA Feature: domain Description: EF-G Location: 1310518-1312612 bp Feature: domain Description: EF-G Location: 1 31 051 8-1 31 261 2 bp Feature: gene Location: 2229466-2229894 bp Ori: QBQ64690.1 Gene: rplM Feature: domain Description: rplM Location: 2229469-2229892 bp Feature: domain Description: rplM Location: 2229469-2229892 bp Feature: gene Location: 2229910-2230305 bp Ori: QBQ64691.1 Gene: rpsI Feature: domain Description: rpsI Location: 2229922-2230303 bp Feature: domain Description: rpsI Location: 2229922-2230303 bp Feature: gene Location: 2232052-2233776 bp Ori: QBQ64692.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2232121-2232361 bp Feature: domain Description: RVT_N Location: 22321 21 -2232361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2232409-2233069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2232409-2233069 bp Feature: domain Description: GIIM Note: maturase Location: 2233120-2233354 bp Feature: domain Description: GIIM Note: maturase Location: 22331 20-2233354 bp Feature: domain Description: HNHc Note: nucleases Location: 2233582-2233738 bp Feature: domain Description: HNHc Note: nucleases Location: 2233582-2233738 bp Feature: gene Location: 2233954-2234727 bp Ori: QBQ64693.1 Gene: yaaA Feature: domain Description: PRK02101 Location: 2233957-2234722 bp Feature: domain Description: PRK021 01 Location: 2233957-2234722 bp Feature: gene Location: 2234735-2235277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), SseA (COG2897), Sulf_transp (pfam04143), GIIM (pfam08388), HNHc (smart00507), EF-Tu (TIGR00485)
EF-G (TIGR00484), PRK02101 (peroxide stress protein YaaA)