myRT

myRT report for GCA_004759025.1_ASM475902v1

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Seq: CP038505.1 Escherichia coli strain 28Eco12 chromosome, complete genome (5343367 bp)
Overview 1 RT 1: 3246250-3249627 bp 2 RT 2: 4132094-4138125 bp 3 RT 3: 4790078-4794361 bp Neighborhood of RT #1 [3246250, 3250056] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [4132094, 4138125] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Neighborhood of RT #3 [4790078, 4794369] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 3246250-3246507 bp Feature: gene Location: 3246590-3247077 bp Feature: domain Description: PHA02517 Location: 3246593-3246764 bp Feature: domain Description: PHA0251 7 Location: 3246593-3246764 bp Feature: gene Location: 3247158-3248666 bp Ori: QBY21212.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3247416-3248148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324741 6-32481 48 bp Feature: domain Description: GIIM Note: maturase Location: 3248223-3248421 bp Feature: domain Description: GIIM Note: maturase Location: 3248223-3248421 bp Feature: gene Location: 3248975-3249343 bp Feature: gene Location: 3249339-3250056 bp Feature: domain Description: InsE Location: 3249378-3249627 bp Feature: domain Description: InsE Location: 3249378-3249627 bp Feature: gene Location: 4132094-4133014 bp Ori: QBY20024.1 Feature: domain Description: AbiEii Location: 4132136-4132877 bp Feature: domain Description: AbiEii Location: 41 321 36-41 32877 bp Feature: gene Location: 4133001-4133804 bp Ori: QBY20025.1 Feature: domain Description: AbiEi_3_N Location: 4133034-4133295 bp Feature: domain Description: AbiEi_3_N Location: 41 33034-41 33295 bp Feature: domain Description: AbiEi_3 Location: 4133307-4133763 bp Feature: domain Description: AbiEi_3 Location: 41 33307-41 33763 bp Feature: gene Location: 4134099-4137308 bp Ori: QBY20026.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4134627-4135116 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 41 34627-41 351 1 6 bp Feature: domain Description: nitrilase Location: 4136622-4137219 bp Feature: domain Description: nitrilase Location: 41 36622-41 3721 9 bp Feature: gene Location: 4137469-4137609 bp Ori: QBY20027.1 Feature: domain Description: Phage_ASH Location: 4137496-4137589 bp Feature: domain Description: Phage_ASH Location: 41 37496-41 37589 bp Feature: gene Location: 4137655-4138125 bp Feature: gene Location: 4790078-4790983 bp Feature: gene Location: 4790957-4791244 bp Feature: gene Location: 4791469-4791860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4791799-4791859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4791 799-4791 859 bp Feature: gene Location: 4792036-4792557 bp Ori: QBY20603.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4792042-4792324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4792042-4792324 bp Feature: domain Description: GIIM Note: maturase Location: 4792372-4792552 bp Feature: domain Description: GIIM Note: maturase Location: 4792372-4792552 bp Feature: gene Location: 4792879-4793067 bp Feature: gene Location: 4793140-4794369 bp Ori: QBY20605.1 Feature: domain Description: YesM Location: 4793620-4794361 bp Feature: domain Description: YesM Location: 4793620-4794361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)
YesM (COG2972)