myRT

myRT report for GCA_004795835.1_ASM479583v1

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Seq: CP039249.1 Sphingomonas sp. PAMC26645 chromosome, complete genome (4283956 bp)
Overview 1 RT 1: 2186086-2191350 bp 2 RT 2: 2339662-2347664 bp 3 RT 3: 3645998-3649100 bp Neighborhood of RT #1 [2186086, 2191350] GlcD RVT-GII YecT Neighborhood of RT #2 [2339662, 2347711] CsdA ligand_gated_channel RVT-GII GIIM emrE PPPi Neighborhood of RT #3 [3645998, 3649100] RVT-GII Feature: gene Location: 2186086-2186349 bp Feature: gene Location: 2186277-2187998 bp Ori: QCB42579.1 Feature: domain Description: GlcD Location: 2186574-2187912 bp Feature: domain Description: GlcD Location: 21 86574-21 8791 2 bp Feature: gene Location: 2188796-2189968 bp Ori: QCB42580.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2189150-2189813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 891 50-21 8981 3 bp Feature: gene Location: 2189848-2190219 bp Ori: QCB42581.1 Feature: domain Description: YecT Location: 2189884-2190196 bp Feature: domain Description: YecT Location: 21 89884-21 901 96 bp Feature: gene Location: 2190301-2191350 bp Feature: gene Location: 2339662-2340870 bp Ori: QCB44355.1 Feature: domain Description: CsdA Location: 2339758-2340859 bp Feature: domain Description: CsdA Location: 2339758-2340859 bp Feature: gene Location: 2340918-2343296 bp Ori: QCB42689.1 Feature: domain Description: ligand_gated_channel Location: 2341089-2343294 bp Feature: domain Description: ligand_gated_channel Location: 2341 089-2343294 bp Feature: gene Location: 2343912-2345306 bp Ori: QCB42690.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2344266-2344929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2344266-2344929 bp Feature: domain Description: GIIM Note: maturase Location: 2344998-2345214 bp Feature: domain Description: GIIM Note: maturase Location: 2344998-234521 4 bp Feature: gene Location: 2345539-2345868 bp Ori: QCB42691.1 Feature: domain Description: emrE Location: 2345545-2345866 bp Feature: domain Description: emrE Location: 2345545-2345866 bp Feature: gene Location: 2346251-2347711 bp Ori: QCB44356.1 Feature: domain Description: PPPi Location: 2346257-2347664 bp Feature: domain Description: PPPi Location: 2346257-2347664 bp Feature: gene Location: 3645998-3646684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646352-3646682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646352-3646682 bp Feature: gene Location: 3647245-3647715 bp Feature: gene Location: 3648141-3649100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlcD (COG0277), RVT-GII, YecT (COG3755), CsdA (COG0520), ligand_gated_channel (cd01347), GIIM (pfam08388), emrE (PRK09541), PPPi (COG3025)