myRT

myRT report for GCA_004795975.1_ASM479597v1

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Seq: CP034335.1 Wolbachia endosymbiont of Drosophila mauritiana strain wMau chromosome, complete genome (1273530 bp)
Overview 1 RT 1: 64409-68158 bp 2 RT 2: 374497-378494 bp 3 RT 3: 386004-390068 bp 4 RT 4: 428982-433336 bp 5 RT 5: 691569-694760 bp 6 RT 6: 733964-738039 bp 7 RT 7: 956502-966387 bp 8 RT 8: 1201629-1204935 bp Neighborhood of RT #1 [64409, 68158] RVT_N RVT-GII YkfC ANK ANK ANK Neighborhood of RT #2 [374497, 378494] dcd RVT_N RVT-GII YkfC Neighborhood of RT #3 [386004, 390068] FeS_assembly_P ParA ANK RVT_N RVT-GII YkfC Neighborhood of RT #4 [428982, 433336] recomb_XerD PRK06620 RVT_N RVT-GII YkfC Neighborhood of RT #5 [691569, 694760] PuuD PuuD Rve RVT-GII RVT-GII GIIM Neighborhood of RT #6 [733964, 738113] tatA ExoD RVT-GII Intron_maturas2 HNHc ExoD Neighborhood of RT #7 [956502, 966641] ANK ANK ANK Ank_4 ANK ANK ANK ANK PHA02741 RVT-GII Intron_maturas2 HNHc RVT-GII GIIM mutL HTH_XRE T_den_put_tspse HTH_XRE Neighborhood of RT #8 [1201629, 1204935] Phage_TAC_7 T_den_put_tspse RVT_N RVT-GII YkfC Feature: gene Location: 64409-64609 bp Feature: gene Location: 64770-65034 bp Feature: gene Location: 65043-66590 bp Ori: QCB63212.1 Gene: ltrA Feature: domain Description: RVT_N Location: 65094-65337 bp Feature: domain Description: RVT_N Location: 65094-65337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65382-66033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65382-66033 bp Feature: domain Description: YkfC Location: 66033-66366 bp Feature: domain Description: YkfC Location: 66033-66366 bp Feature: gene Location: 66710-67642 bp Feature: domain Description: ANK Location: 67019-67217 bp Feature: domain Description: ANK Location: 6701 9-6721 7 bp Feature: domain Description: ANK Location: 67241-67322 bp Feature: domain Description: ANK Location: 67241 -67322 bp Feature: domain Description: ANK Location: 67337-67640 bp Feature: domain Description: ANK Location: 67337-67640 bp Feature: gene Location: 67670-68158 bp Feature: gene Location: 374497-375054 bp Ori: QCB63469.1 Feature: domain Description: dcd Location: 374506-375043 bp Feature: domain Description: dcd Location: 374506-375043 bp Feature: gene Location: 375060-376073 bp Feature: gene Location: 376304-377851 bp Ori: QCB63471.1 Gene: ltrA Feature: domain Description: RVT_N Location: 376355-376598 bp Feature: domain Description: RVT_N Location: 376355-376598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376643-377294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376643-377294 bp Feature: domain Description: YkfC Location: 377294-377627 bp Feature: domain Description: YkfC Location: 377294-377627 bp Feature: gene Location: 377860-378124 bp Feature: gene Location: 378285-378494 bp Feature: gene Location: 386004-387023 bp Ori: QCB63475.1 Feature: domain Description: FeS_assembly_P Location: 386046-386229 bp Feature: domain Description: FeS_assembly_P Location: 386046-386229 bp Feature: domain Description: ParA Location: 386289-386997 bp Feature: domain Description: ParA Location: 386289-386997 bp Feature: gene Location: 387103-387765 bp Ori: QCB63476.1 Feature: domain Description: ANK Location: 387283-387757 bp Feature: domain Description: ANK Location: 387283-387757 bp Feature: gene Location: 387884-389431 bp Ori: QCB63477.1 Gene: ltrA Feature: domain Description: RVT_N Location: 387935-388178 bp Feature: domain Description: RVT_N Location: 387935-3881 78 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388223-388874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388223-388874 bp Feature: domain Description: YkfC Location: 388874-389207 bp Feature: domain Description: YkfC Location: 388874-389207 bp Feature: gene Location: 389440-389704 bp Feature: gene Location: 389865-390068 bp Feature: gene Location: 428982-429968 bp Ori: QCB63516.1 Feature: domain Description: recomb_XerD Location: 429033-429948 bp Feature: domain Description: recomb_XerD Location: 429033-429948 bp Feature: gene Location: 430340-430975 bp Ori: QCB63517.1 Feature: domain Description: PRK06620 Location: 430364-430958 bp Feature: domain Description: PRK06620 Location: 430364-430958 bp Feature: gene Location: 431152-432699 bp Ori: QCB63518.1 Gene: ltrA Feature: domain Description: RVT_N Location: 431203-431446 bp Feature: domain Description: RVT_N Location: 431 203-431 446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431491-432142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 491 -4321 42 bp Feature: domain Description: YkfC Location: 432142-432475 bp Feature: domain Description: YkfC Location: 4321 42-432475 bp Feature: gene Location: 432708-432972 bp Feature: gene Location: 433133-433336 bp Feature: gene Location: 691569-692507 bp Ori: QCB63698.1 Feature: domain Description: PuuD Location: 691959-692199 bp Feature: domain Description: PuuD Location: 691 959-6921 99 bp Feature: domain Description: PuuD Location: 692313-692454 bp Feature: domain Description: PuuD Location: 69231 3-692454 bp Feature: gene Location: 692699-693149 bp Feature: domain Description: Rve Location: 692762-693032 bp Feature: domain Description: Rve Location: 692762-693032 bp Feature: gene Location: 693312-693491 bp Ori: QCB63699.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693315-693441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69331 5-693441 bp Feature: gene Location: 693498-693701 bp Ori: QCB64172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693504-693690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693504-693690 bp Feature: gene Location: 693796-694152 bp Ori: QCB63700.1 Feature: domain Description: GIIM Note: maturase Location: 693808-693991 bp Feature: domain Description: GIIM Note: maturase Location: 693808-693991 bp Feature: gene Location: 694340-694760 bp Feature: gene Location: 733964-734131 bp Ori: QCB63723.1 Gene: tatA Feature: domain Description: tatA Location: 733982-734105 bp Feature: domain Description: tatA Location: 733982-7341 05 bp Feature: gene Location: 734265-734756 bp Feature: domain Description: ExoD Location: 734310-734757 bp Feature: domain Description: ExoD Location: 73431 0-734757 bp Feature: gene Location: 734860-736653 bp Ori: QCB63724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735127-735916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7351 27-73591 6 bp Feature: domain Description: Intron_maturas2 Location: 736009-736270 bp Feature: domain Description: Intron_maturas2 Location: 736009-736270 bp Feature: domain Description: HNHc Note: nucleases Location: 736426-736606 bp Feature: domain Description: HNHc Note: nucleases Location: 736426-736606 bp Feature: gene Location: 737187-737342 bp Feature: gene Location: 737457-738113 bp Ori: QCB63725.1 Feature: domain Description: ExoD Location: 737502-738039 bp Feature: domain Description: ExoD Location: 737502-738039 bp Feature: gene Location: 956502-959102 bp Ori: QCB63887.1 Feature: domain Description: ANK Location: 956568-956679 bp Feature: domain Description: ANK Location: 956568-956679 bp Feature: domain Description: ANK Location: 956688-957054 bp Feature: domain Description: ANK Location: 956688-957054 bp Feature: domain Description: ANK Location: 957198-957576 bp Feature: domain Description: ANK Location: 9571 98-957576 bp Feature: domain Description: Ank_4 Location: 957657-957777 bp Feature: domain Description: Ank_4 Location: 957657-957777 bp Feature: domain Description: ANK Location: 957810-958110 bp Feature: domain Description: ANK Location: 95781 0-9581 1 0 bp Feature: domain Description: ANK Location: 958116-958377 bp Feature: domain Description: ANK Location: 9581 1 6-958377 bp Feature: domain Description: ANK Location: 958395-958650 bp Feature: domain Description: ANK Location: 958395-958650 bp Feature: domain Description: ANK Location: 958689-958854 bp Feature: domain Description: ANK Location: 958689-958854 bp Feature: domain Description: PHA02741 Location: 958869-959037 bp Feature: domain Description: PHA02741 Location: 958869-959037 bp Feature: gene Location: 959288-959524 bp Feature: gene Location: 959581-961374 bp Ori: QCB63889.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959848-960637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959848-960637 bp Feature: domain Description: Intron_maturas2 Location: 960730-960991 bp Feature: domain Description: Intron_maturas2 Location: 960730-960991 bp Feature: domain Description: HNHc Note: nucleases Location: 961147-961327 bp Feature: domain Description: HNHc Note: nucleases Location: 961 1 47-961 327 bp Feature: gene Location: 961932-963179 bp Ori: QCB63890.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962136-962793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9621 36-962793 bp Feature: domain Description: GIIM Note: maturase Location: 962877-963102 bp Feature: domain Description: GIIM Note: maturase Location: 962877-9631 02 bp Feature: gene Location: 963844-965634 bp Ori: QCB63891.1 Gene: mutL Feature: domain Description: mutL Location: 963847-965629 bp Feature: domain Description: mutL Location: 963847-965629 bp Feature: gene Location: 965703-966641 bp Ori: QCB63892.1 Feature: domain Description: HTH_XRE Location: 965754-965925 bp Feature: domain Description: HTH_XRE Location: 965754-965925 bp Feature: domain Description: T_den_put_tspse Location: 965985-966171 bp Feature: domain Description: T_den_put_tspse Location: 965985-9661 71 bp Feature: domain Description: HTH_XRE Location: 966216-966387 bp Feature: domain Description: HTH_XRE Location: 96621 6-966387 bp Feature: gene Location: 1201629-1201883 bp Ori: QCB64073.1 Feature: domain Description: Phage_TAC_7 Location: 1201641-1201860 bp Feature: domain Description: Phage_TAC_7 Location: 1 201 641 -1 201 860 bp Feature: gene Location: 1202017-1202757 bp Ori: QCB64074.1 Feature: domain Description: T_den_put_tspse Location: 1202143-1202737 bp Feature: domain Description: T_den_put_tspse Location: 1 2021 43-1 202737 bp Feature: gene Location: 1202754-1204301 bp Ori: QCB64075.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1202805-1203048 bp Feature: domain Description: RVT_N Location: 1 202805-1 203048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1203093-1203744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 203093-1 203744 bp Feature: domain Description: YkfC Location: 1203744-1204077 bp Feature: domain Description: YkfC Location: 1 203744-1 204077 bp Feature: gene Location: 1204310-1204574 bp Feature: gene Location: 1204735-1204935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), ANK (smart00248), dcd (PRK00416), FeS_assembly_P (pfam01883), ParA (pfam10609), recomb_XerD (TIGR02225), PRK06620 (hypothetical protein; Validated), PuuD (COG2071)
Rve (COG3316), GIIM (pfam08388), tatA (PRK14861), ExoD (pfam06055), Intron_maturas2 (pfam01348), HNHc (smart00507), Ank_4 (pfam13637), PHA02741 (hypothetical protein; Provisional), mutL (PRK00095), HTH_XRE (smart00530)
T_den_put_tspse (TIGR01784), Phage_TAC_7 (pfam10109)