myRT

myRT report for GCA_004801255.1_ASM480125v1

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Seq: CP036295.1 Desulfovibrio desulfuricans strain IC1 chromosome, complete genome (3251440 bp)
Overview 1 RT 1: 3060643-3068823 bp 2 RT 2: 3113985-3118740 bp Neighborhood of RT #1 [3060643, 3068823] CcmE TlyC RVT-UG3 RVT-UG8 Neighborhood of RT #2 [3113985, 3118763] PRK08154 INT_C_like_3 RVT-Retrons HTH_XRE INT_C_like_3 Feature: gene Location: 3060643-3061053 bp Ori: QCC86758.1 Feature: domain Description: CcmE Location: 3060655-3061036 bp Feature: domain Description: CcmE Location: 3060655-3061 036 bp Feature: gene Location: 3061748-3062785 bp Ori: QCC86759.1 Feature: domain Description: TlyC Location: 3061754-3062747 bp Feature: domain Description: TlyC Location: 3061 754-3062747 bp Feature: gene Location: 3063628-3064923 bp Ori: QCC86760.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3063949-3064465 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3063949-3064465 bp Feature: gene Location: 3064916-3066817 bp Ori: QCC86761.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3065393-3065834 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3065393-3065834 bp Feature: gene Location: 3067291-3067701 bp Feature: gene Location: 3068149-3068823 bp Feature: gene Location: 3113985-3114335 bp Ori: QCC86804.1 Feature: domain Description: PRK08154 Location: 3114024-3114318 bp Feature: domain Description: PRK081 54 Location: 31 1 4024-31 1 431 8 bp Feature: gene Location: 3115444-3116037 bp Ori: QCC86805.1 Feature: domain Description: INT_C_like_3 Location: 3115486-3116014 bp Feature: domain Description: INT_C_like_3 Location: 31 1 5486-31 1 601 4 bp Feature: gene Location: 3116283-3117170 bp Ori: QCC86806.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3116439-3116970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 1 6439-31 1 6970 bp Feature: gene Location: 3117139-3117429 bp Ori: QCC86807.1 Feature: domain Description: HTH_XRE Location: 3117154-3117319 bp Feature: domain Description: HTH_XRE Location: 31 1 71 54-31 1 731 9 bp Feature: gene Location: 3118476-3118763 bp Feature: domain Description: INT_C_like_3 Location: 3118488-3118740 bp Feature: domain Description: INT_C_like_3 Location: 31 1 8488-31 1 8740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmE (pfam03100), TlyC (COG1253), RVT-UG3, RVT-UG8, PRK08154 (anaerobic benzoate catabolism transcriptional regulator; Reviewed), INT_C_like_3 (cd01192), RVT-Retrons, HTH_XRE (smart00530)