myRT

myRT report for GCA_004919145.1_ASM491914v1

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Seq: CP039561.1 Salmonella enterica subsp. enterica strain 1607:MR00001R chromosome, complete genome (4976848 bp)
Overview 1 RT 1: 4087649-4094003 bp Neighborhood of RT #1 [4087649, 4094008] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 4087649-4088869 bp Feature: domain Description: PRK09692 Location: 4087658-4088807 bp Feature: domain Description: PRK09692 Location: 4087658-4088807 bp Feature: gene Location: 4089194-4090156 bp Feature: gene Location: 4090222-4091091 bp Ori: QCF75160.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4090267-4090852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4090267-4090852 bp Feature: gene Location: 4091893-4093080 bp Ori: QCF74257.1 Feature: domain Description: PRK10473 Location: 4091896-4093072 bp Feature: domain Description: PRK1 0473 Location: 4091 896-4093072 bp Feature: gene Location: 4093049-4094008 bp Ori: QCF74258.1 Gene: yidZ Feature: domain Description: PRK10216 Location: 4093052-4094003 bp Feature: domain Description: PRK1 021 6 Location: 4093052-4094003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)

Seq: CP039563.1 Salmonella enterica subsp. enterica strain 1607:MR00001R plasmid p08-5333.2, complete sequence (4148 bp)
Overview 1 RT 1: 1-1874 bp Neighborhood of RT #1 [1, 1874] RVT-Retrons CspC Feature: gene Location: 1-1140 bp Ori: QCF75416.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145-700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145-700 bp Feature: gene Location: 1145-1348 bp Ori: QCF75417.1 Feature: domain Description: CspC Location: 1148-1343 bp Feature: domain Description: CspC Location: 1148-1343 bp Feature: gene Location: 1607-1874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)